Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 FGFR3P1-201ENST00000449999 601 ntBASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 ALG3P1-201ENST00000508806 1114 ntBASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 MIR4750-201ENST00000584564 56 ntBASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 WDR7-208ENST00000589935 544 ntTSL 4 BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 MBLAC2-202ENST00000514906 1936 ntBASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC52A1Q9NWF4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 AC239868.1-201ENST00000369385 493 ntBASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 RN7SL181P-201ENST00000462921 277 ntBASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 POU5F1P2-201ENST00000521750 823 ntBASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 AC008805.1-201ENST00000590892 364 ntBASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 AC009090.5-201ENST00000624886 2285 ntBASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
SLC52A1Q9NWF4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 SLC9A7P1-202ENST00000556476 2239 ntBASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 AC078875.1-201ENST00000431907 724 ntBASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 SCARNA21-201ENST00000517026 139 ntBASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 IGLV3-15-201ENST00000518356 244 ntBASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 NEU3-205ENST00000531619 582 ntTSL 5 BASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 AC051619.9-201ENST00000623237 597 ntBASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 TBC1D3J-201ENST00000620719 1426 ntBASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 REXO1L4P-201ENST00000605109 1937 ntBASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 AC099398.1-201ENST00000567919 2776 ntBASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC52A1Q9NWF4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 AC006449.5-201ENST00000610658 2098 ntBASIC21.67■■□□□ 1.06
SLC52A1Q9NWF4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms