Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.73■□□□□ 0.11
TMEM248Q9NWD8 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TMEM248Q9NWD8 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM248Q9NWD8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 AL360270.3-201ENST00000609118 1348 ntBASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 AL139094.1-201ENST00000405549 1188 ntBASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 AC114812.1-204ENST00000449669 728 ntBASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 KRT17P7-201ENST00000451704 1104 ntBASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 TDH-203ENST00000531764 1110 ntBASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 PTP4A1P2-201ENST00000546033 454 ntBASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM248Q9NWD8 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 KLF2P2-201ENST00000416807 1039 ntBASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 HLA-K-203ENST00000430151 1046 ntBASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 TTTY23B-201ENST00000442790 549 ntBASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 AC012441.1-201ENST00000446669 685 ntBASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 AC068587.3-201ENST00000526613 355 ntBASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM248Q9NWD8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.71■□□□□ 0.1
TMEM248Q9NWD8 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.71■□□□□ 0.1
TMEM248Q9NWD8 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.71■□□□□ 0.1
TMEM248Q9NWD8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
TMEM248Q9NWD8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TMEM248Q9NWD8 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TMEM248Q9NWD8 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TMEM248Q9NWD8 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.71■□□□□ 0.1
TMEM248Q9NWD8 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TMEM248Q9NWD8 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms