Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 SLC7A15P-201ENST00000424028 1363 ntBASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 AL391825.1-201ENST00000457671 1364 ntBASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 MROH4P-201ENST00000431302 1578 ntBASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 DFFBP1-201ENST00000433250 979 ntBASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 AC004233.3-201ENST00000607794 1269 ntBASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 WASH3P-207ENST00000560956 1394 ntBASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 AC087499.6-201ENST00000411576 835 ntBASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 AC104596.2-201ENST00000512793 793 ntBASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 LINC02560-201ENST00000596379 459 ntBASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms