Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 AC079178.1-201ENST00000420915 656 ntBASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 FTLP1-201ENST00000449155 526 ntBASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 FGFR3P5-201ENST00000564496 886 ntBASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 AC112693.3-201ENST00000624819 1983 ntBASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 SSR4P1-203ENST00000599569 2260 ntBASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDLIM7Q9NR12 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDLIM7Q9NR12 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDLIM7Q9NR12 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
PDLIM7Q9NR12 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.08■□□□□ 0.33
PDLIM7Q9NR12 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PDLIM7Q9NR12 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PDLIM7Q9NR12 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PDLIM7Q9NR12 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PDLIM7Q9NR12 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.08■□□□□ 0.33
PDLIM7Q9NR12 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PDLIM7Q9NR12 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PDLIM7Q9NR12 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDLIM7Q9NR12 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PDLIM7Q9NR12 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 AC007787.1-201ENST00000588095 1583 ntBASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 RPL17P11-201ENST00000417593 544 ntBASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 SERPINA13P-202ENST00000478994 924 ntBASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 AC134698.3-201ENST00000523880 214 ntBASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 RN7SL48P-201ENST00000579283 293 ntBASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDLIM7Q9NR12 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms