Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 RPL13P2-201ENST00000440687 659 ntBASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 KRT18P43-201ENST00000469825 1281 ntBASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 Z92544.3-201ENST00000624747 417 ntBASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 AL645728.2-202ENST00000641679 227 ntBASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 TUBB3P1-201ENST00000405796 1332 ntBASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
NEUROD4Q9HD90 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.65□□□□□ -0.07
NEUROD4Q9HD90 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 BASP1P1-201ENST00000430708 665 ntBASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 KLF2P3-201ENST00000451977 1087 ntBASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 AC098799.1-201ENST00000504752 800 ntBASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 AL512361.1-201ENST00000554200 418 ntBASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 AL138828.2-201ENST00000615812 383 ntBASIC14.64□□□□□ -0.07
NEUROD4Q9HD90 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms