Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TM9SF3Q9HD45 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TM9SF3Q9HD45 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TM9SF3Q9HD45 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TM9SF3Q9HD45 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TM9SF3Q9HD45 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TM9SF3Q9HD45 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TM9SF3Q9HD45 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TM9SF3Q9HD45 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TM9SF3Q9HD45 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 AC018892.3-201ENST00000623986 2499 ntBASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 ACKR1-201ENST00000368121 1240 ntBASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 AC026954.1-201ENST00000429771 1293 ntBASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 AC022137.2-201ENST00000503482 481 ntBASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 AC010328.2-201ENST00000597698 1111 ntBASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 AC093813.1-201ENST00000605066 256 ntBASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 RHOXF1P1-202ENST00000635473 501 ntBASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TM9SF3Q9HD45 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 C2orf27AP3-201ENST00000434123 579 ntBASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 AC108725.1-201ENST00000495472 409 ntBASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 GNRHR2-203ENST00000581100 1187 ntBASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 AC107373.2-201ENST00000607735 490 ntBASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 AL354718.3-201ENST00000616414 581 ntBASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 CR382287.1-201ENST00000623954 586 ntBASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TM9SF3Q9HD45 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms