Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VAT1LQ9HCJ6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 PTP4A1P2-201ENST00000546033 454 ntBASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 AC134312.5-201ENST00000568031 1313 ntBASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 AC018665.1-201ENST00000622927 1362 ntBASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.88■□□□□ 0.45
VAT1LQ9HCJ6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 AC079776.1-201ENST00000401540 1152 ntBASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 BAATP1-201ENST00000412284 1225 ntBASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 GPR53P-205ENST00000457298 1084 ntBASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 AC068587.3-201ENST00000526613 355 ntBASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 AP002414.2-201ENST00000591780 3365 ntBASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 SSR4P1-203ENST00000599569 2260 ntBASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 TSPY26P-202ENST00000565928 3884 ntBASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.87■□□□□ 0.45
VAT1LQ9HCJ6 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAT1LQ9HCJ6 CICP6-201ENST00000457191 2729 ntBASIC17.86■□□□□ 0.45
VAT1LQ9HCJ6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAT1LQ9HCJ6 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VAT1LQ9HCJ6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VAT1LQ9HCJ6 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.86■□□□□ 0.45
VAT1LQ9HCJ6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.86■□□□□ 0.45
VAT1LQ9HCJ6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms