Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 MIR33B-201ENST00000385104 96 ntBASIC18.01■□□□□ 0.47
EFCC1Q9HA90 MIR1202-201ENST00000408529 83 ntBASIC18.01■□□□□ 0.47
EFCC1Q9HA90 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 KLK3-207ENST00000595952 969 ntTSL 3 BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 AC097724.1-201ENST00000609581 426 ntBASIC18.01■□□□□ 0.47
EFCC1Q9HA90 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC18■□□□□ 0.47
EFCC1Q9HA90 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18■□□□□ 0.47
EFCC1Q9HA90 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18■□□□□ 0.47
EFCC1Q9HA90 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
EFCC1Q9HA90 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
EFCC1Q9HA90 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
EFCC1Q9HA90 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18■□□□□ 0.47
EFCC1Q9HA90 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
EFCC1Q9HA90 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18■□□□□ 0.47
EFCC1Q9HA90 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC18■□□□□ 0.47
EFCC1Q9HA90 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC18■□□□□ 0.47
EFCC1Q9HA90 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC18■□□□□ 0.47
EFCC1Q9HA90 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC18■□□□□ 0.47
EFCC1Q9HA90 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
EFCC1Q9HA90 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18■□□□□ 0.47
EFCC1Q9HA90 AC245884.6-201ENST00000515672 1067 ntBASIC18■□□□□ 0.47
EFCC1Q9HA90 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18■□□□□ 0.47
EFCC1Q9HA90 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC18■□□□□ 0.47
EFCC1Q9HA90 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC18■□□□□ 0.47
EFCC1Q9HA90 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC18■□□□□ 0.47
EFCC1Q9HA90 AL451050.2-201ENST00000606967 682 ntBASIC18■□□□□ 0.47
EFCC1Q9HA90 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18■□□□□ 0.47
EFCC1Q9HA90 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18■□□□□ 0.47
EFCC1Q9HA90 AC091812.3-201ENST00000621362 345 ntBASIC18■□□□□ 0.47
EFCC1Q9HA90 CU633904.3-201ENST00000624042 1029 ntBASIC18■□□□□ 0.47
EFCC1Q9HA90 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18■□□□□ 0.47
EFCC1Q9HA90 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18■□□□□ 0.47
EFCC1Q9HA90 AC104581.4-201ENST00000623126 3052 ntBASIC18■□□□□ 0.47
EFCC1Q9HA90 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
EFCC1Q9HA90 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
EFCC1Q9HA90 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
EFCC1Q9HA90 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18■□□□□ 0.47
EFCC1Q9HA90 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18■□□□□ 0.47
EFCC1Q9HA90 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
EFCC1Q9HA90 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
EFCC1Q9HA90 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
EFCC1Q9HA90 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
EFCC1Q9HA90 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
EFCC1Q9HA90 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
EFCC1Q9HA90 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18■□□□□ 0.47
EFCC1Q9HA90 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
EFCC1Q9HA90 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 AC018892.3-201ENST00000623986 2499 ntBASIC17.99■□□□□ 0.47
EFCC1Q9HA90 DRD5P1-201ENST00000456605 1438 ntBASIC17.99■□□□□ 0.47
EFCC1Q9HA90 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.99■□□□□ 0.47
EFCC1Q9HA90 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 MAGEA5-201ENST00000446757 942 ntBASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms