Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 MIR661-201ENST00000384842 89 ntBASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 DFFBP1-201ENST00000433250 979 ntBASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 TSPY16P-201ENST00000449843 468 ntBASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 AC093813.1-201ENST00000605066 256 ntBASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.25■□□□□ 0.35
CCSER1Q9C0I3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 AL645937.2-201ENST00000396808 931 ntBASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 AC093726.1-201ENST00000608064 963 ntBASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 AL391825.1-201ENST00000457671 1364 ntBASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCSER1Q9C0I3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 AC099063.4-201ENST00000641099 1602 ntBASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 AL442647.2-201ENST00000429864 857 ntBASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.23■□□□□ 0.35
CCSER1Q9C0I3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms