Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 SPDYE13P-201ENST00000445314 798 ntBASIC12.59□□□□□ -0.39
NKX6-2Q9C056 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 MINOS1P3-201ENST00000457048 203 ntBASIC12.59□□□□□ -0.39
NKX6-2Q9C056 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 AC005363.2-201ENST00000618631 242 ntBASIC12.59□□□□□ -0.39
NKX6-2Q9C056 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NKX6-2Q9C056 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
NKX6-2Q9C056 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.58□□□□□ -0.39
NKX6-2Q9C056 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.39
NKX6-2Q9C056 AC131212.3-201ENST00000624087 4219 ntBASIC12.58□□□□□ -0.39
NKX6-2Q9C056 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 FUOM-202ENST00000368551 628 ntTSL 3 BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 PAWRP1-201ENST00000451083 565 ntBASIC12.58□□□□□ -0.4
NKX6-2Q9C056 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 AC087641.1-201ENST00000557561 1021 ntBASIC12.58□□□□□ -0.4
NKX6-2Q9C056 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 AC083849.1-201ENST00000615227 514 ntBASIC12.58□□□□□ -0.4
NKX6-2Q9C056 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NKX6-2Q9C056 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 AC005622.1-201ENST00000636801 1703 ntBASIC12.57□□□□□ -0.4
NKX6-2Q9C056 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.57□□□□□ -0.4
NKX6-2Q9C056 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms