Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 AC018635.2-201ENST00000608625 364 ntBASIC18.61■□□□□ 0.57
CRAMP1Q96RY5 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
CRAMP1Q96RY5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CRAMP1Q96RY5 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CRAMP1Q96RY5 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CRAMP1Q96RY5 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CRAMP1Q96RY5 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CRAMP1Q96RY5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CRAMP1Q96RY5 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CRAMP1Q96RY5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CRAMP1Q96RY5 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC18.61■□□□□ 0.57
CRAMP1Q96RY5 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 E2F3P2-201ENST00000447755 1422 ntBASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 AC092978.1-202ENST00000637590 1327 ntBASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 RN7SKP214-201ENST00000364208 315 ntBASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 IGF1-203ENST00000392904 761 ntTSL 5 BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 AL353637.1-201ENST00000451571 732 ntBASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 AC103988.2-201ENST00000561804 725 ntBASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 AC020922.3-201ENST00000595064 547 ntBASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 AC009093.2-202ENST00000620513 2079 ntBASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CRAMP1Q96RY5 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 AC006480.2-201ENST00000609770 1337 ntBASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 RBM38-204ENST00000371219 760 ntTSL 2 BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 HLA-J-204ENST00000495278 958 ntBASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 AP000346.4-201ENST00000614827 381 ntBASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CRAMP1Q96RY5 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CRAMP1Q96RY5 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
CRAMP1Q96RY5 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CRAMP1Q96RY5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CRAMP1Q96RY5 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CRAMP1Q96RY5 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.58■□□□□ 0.57
CRAMP1Q96RY5 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CRAMP1Q96RY5 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CRAMP1Q96RY5 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 PDIA3P2-201ENST00000428073 158 ntBASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.58■□□□□ 0.56
CRAMP1Q96RY5 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms