Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 MIR1249-201ENST00000408671 66 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 KRT18P4-201ENST00000422599 1288 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 CDC23-208ENST00000505120 455 ntTSL 3 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 RPL10P8-201ENST00000522888 313 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 MBP-230ENST00000528160 584 ntTSL 5 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AC120498.7-201ENST00000562876 330 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 ANKRD26P1-203ENST00000569528 966 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AC090616.6-202ENST00000583601 1088 ntBASIC4.52□□□□□ -1.69
HMCN1Q96RW7 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 AC009061.2-204ENST00000602476 524 ntTSL 3 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 EPM2A-214ENST00000638783 801 ntTSL 5 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 EPM2A-229ENST00000640980 647 ntTSL 3 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 FAM239A-201ENST00000381108 2198 ntTSL 2 BASIC4.52□□□□□ -1.69
HMCN1Q96RW7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 MGST3-204ENST00000367888 778 ntTSL 3 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 RAB13-201ENST00000368575 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 IGKV2-28-201ENST00000482769 390 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 SRP14-208ENST00000560773 468 ntTSL 3 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 SNHG15-210ENST00000585030 953 ntTSL 3 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 AC148476.1-201ENST00000622182 705 ntBASIC4.51□□□□□ -1.69
HMCN1Q96RW7 TTC38-207ENST00000629918 162 ntTSL 5 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 GNLY-201ENST00000263863 846 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 AL161727.1-201ENST00000457409 530 ntBASIC4.51□□□□□ -1.69
HMCN1Q96RW7 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 AC009132.1-201ENST00000565194 320 ntBASIC4.51□□□□□ -1.69
HMCN1Q96RW7 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 AC004466.1-201ENST00000599515 1080 ntBASIC4.51□□□□□ -1.69
HMCN1Q96RW7 AZU1P1-201ENST00000603479 385 ntBASIC4.51□□□□□ -1.69
HMCN1Q96RW7 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC4.51□□□□□ -1.69
HMCN1Q96RW7 TUBB8P12-201ENST00000308911 1335 ntBASIC4.51□□□□□ -1.69
HMCN1Q96RW7 TUBB7P-202ENST00000428444 1305 ntBASIC4.51□□□□□ -1.69
HMCN1Q96RW7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
HMCN1Q96RW7 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms