Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 AL591122.2-201ENST00000624125 1853 ntBASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 PTCHD3P3-201ENST00000403073 906 ntBASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 BX005266.1-201ENST00000473402 457 ntBASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 AC114341.1-201ENST00000618070 349 ntBASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 AL022326.1-202ENST00000641533 845 ntBASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RAB3IPQ96QF0 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 AC243562.2-201ENST00000561247 970 ntBASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB3IPQ96QF0 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 AC023090.2-201ENST00000625182 2110 ntBASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 AC131212.3-201ENST00000624087 4219 ntBASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 MIR1224-201ENST00000408193 85 ntBASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 GPX1P2-201ENST00000429271 606 ntBASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 FAM86EP-206ENST00000510506 987 ntBASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.13■□□□□ 0.01
RAB3IPQ96QF0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms