Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
COL21A1Q96P44 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL21A1Q96P44 AC087499.5-201ENST00000452760 1342 ntBASIC14.67□□□□□ -0.06
COL21A1Q96P44 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL21A1Q96P44 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL21A1Q96P44 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL21A1Q96P44 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL21A1Q96P44 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL21A1Q96P44 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL21A1Q96P44 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
COL21A1Q96P44 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.67□□□□□ -0.06
COL21A1Q96P44 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
COL21A1Q96P44 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
COL21A1Q96P44 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
COL21A1Q96P44 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL21A1Q96P44 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.67□□□□□ -0.06
COL21A1Q96P44 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.67□□□□□ -0.06
COL21A1Q96P44 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL21A1Q96P44 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL21A1Q96P44 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.67□□□□□ -0.06
COL21A1Q96P44 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.67□□□□□ -0.06
COL21A1Q96P44 HIST3H2BA-201ENST00000436555 524 ntBASIC14.67□□□□□ -0.06
COL21A1Q96P44 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.67□□□□□ -0.06
COL21A1Q96P44 AL512638.1-201ENST00000457493 794 ntBASIC14.67□□□□□ -0.06
COL21A1Q96P44 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.67□□□□□ -0.06
COL21A1Q96P44 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.67□□□□□ -0.06
COL21A1Q96P44 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL21A1Q96P44 AC005498.2-205ENST00000593218 784 ntBASIC14.67□□□□□ -0.06
COL21A1Q96P44 AL390955.2-201ENST00000603032 514 ntBASIC14.67□□□□□ -0.06
COL21A1Q96P44 AC097359.3-201ENST00000603982 1210 ntBASIC14.67□□□□□ -0.06
COL21A1Q96P44 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
COL21A1Q96P44 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL21A1Q96P44 KRT8P44-201ENST00000441609 1350 ntBASIC14.67□□□□□ -0.06
COL21A1Q96P44 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL21A1Q96P44 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL21A1Q96P44 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.67□□□□□ -0.06
COL21A1Q96P44 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
COL21A1Q96P44 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL21A1Q96P44 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL21A1Q96P44 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL21A1Q96P44 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL21A1Q96P44 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL21A1Q96P44 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL21A1Q96P44 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.67□□□□□ -0.06
COL21A1Q96P44 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL21A1Q96P44 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL21A1Q96P44 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
COL21A1Q96P44 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL21A1Q96P44 AC097376.2-205ENST00000610159 5334 ntBASIC14.67□□□□□ -0.06
COL21A1Q96P44 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
COL21A1Q96P44 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL21A1Q96P44 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
COL21A1Q96P44 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL21A1Q96P44 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.66□□□□□ -0.06
COL21A1Q96P44 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL21A1Q96P44 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.66□□□□□ -0.06
COL21A1Q96P44 AL359258.3-201ENST00000622910 2331 ntBASIC14.66□□□□□ -0.06
COL21A1Q96P44 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL21A1Q96P44 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL21A1Q96P44 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
COL21A1Q96P44 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL21A1Q96P44 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.66□□□□□ -0.06
COL21A1Q96P44 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL21A1Q96P44 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.66□□□□□ -0.06
COL21A1Q96P44 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL21A1Q96P44 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL21A1Q96P44 MIR770-201ENST00000390219 98 ntBASIC14.66□□□□□ -0.06
COL21A1Q96P44 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.66□□□□□ -0.06
COL21A1Q96P44 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.66□□□□□ -0.06
COL21A1Q96P44 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.66□□□□□ -0.06
COL21A1Q96P44 RNA5SP421-201ENST00000516864 134 ntBASIC14.66□□□□□ -0.06
COL21A1Q96P44 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.66□□□□□ -0.06
COL21A1Q96P44 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.66□□□□□ -0.06
COL21A1Q96P44 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.66□□□□□ -0.06
COL21A1Q96P44 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.66□□□□□ -0.06
COL21A1Q96P44 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
COL21A1Q96P44 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL21A1Q96P44 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL21A1Q96P44 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL21A1Q96P44 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
COL21A1Q96P44 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.66□□□□□ -0.06
COL21A1Q96P44 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms