Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.53□□□□□ -0.24
CPNE2Q96FN4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.53□□□□□ -0.24
CPNE2Q96FN4 C20orf181-201ENST00000623918 480 ntBASIC13.53□□□□□ -0.24
CPNE2Q96FN4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.53□□□□□ -0.24
CPNE2Q96FN4 AC084121.4-201ENST00000641598 221 ntBASIC13.53□□□□□ -0.24
CPNE2Q96FN4 AF228730.8-201ENST00000642140 221 ntBASIC13.53□□□□□ -0.24
CPNE2Q96FN4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.53□□□□□ -0.24
CPNE2Q96FN4 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPNE2Q96FN4 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CPNE2Q96FN4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CPNE2Q96FN4 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CPNE2Q96FN4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPNE2Q96FN4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.53□□□□□ -0.24
CPNE2Q96FN4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPNE2Q96FN4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CPNE2Q96FN4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CPNE2Q96FN4 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.53□□□□□ -0.24
CPNE2Q96FN4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPNE2Q96FN4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CPNE2Q96FN4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPNE2Q96FN4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPNE2Q96FN4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.53□□□□□ -0.24
CPNE2Q96FN4 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPNE2Q96FN4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.53□□□□□ -0.24
CPNE2Q96FN4 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPNE2Q96FN4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CPNE2Q96FN4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE2Q96FN4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.52□□□□□ -0.24
CPNE2Q96FN4 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE2Q96FN4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
CPNE2Q96FN4 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
CPNE2Q96FN4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.52□□□□□ -0.24
CPNE2Q96FN4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE2Q96FN4 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.52□□□□□ -0.24
CPNE2Q96FN4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE2Q96FN4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE2Q96FN4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.52□□□□□ -0.24
CPNE2Q96FN4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE2Q96FN4 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE2Q96FN4 AC005840.4-201ENST00000541242 2494 ntBASIC13.52□□□□□ -0.24
CPNE2Q96FN4 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE2Q96FN4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE2Q96FN4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
CPNE2Q96FN4 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE2Q96FN4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CPNE2Q96FN4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
CPNE2Q96FN4 FO393414.2-201ENST00000405153 598 ntBASIC13.52□□□□□ -0.25
CPNE2Q96FN4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 AL592309.1-201ENST00000443127 649 ntBASIC13.52□□□□□ -0.25
CPNE2Q96FN4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 HNRNPUP1-201ENST00000554987 333 ntBASIC13.52□□□□□ -0.25
CPNE2Q96FN4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 MTDHP5-201ENST00000598980 586 ntBASIC13.52□□□□□ -0.25
CPNE2Q96FN4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CPNE2Q96FN4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.51□□□□□ -0.25
CPNE2Q96FN4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms