Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
RNF183Q96D59 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC11.58□□□□□ -0.56
RNF183Q96D59 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
RNF183Q96D59 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC11.58□□□□□ -0.56
RNF183Q96D59 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RNF183Q96D59 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
RNF183Q96D59 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC11.57□□□□□ -0.56
RNF183Q96D59 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC11.57□□□□□ -0.56
RNF183Q96D59 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC11.57□□□□□ -0.56
RNF183Q96D59 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
RNF183Q96D59 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
RNF183Q96D59 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC11.57□□□□□ -0.56
RNF183Q96D59 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 AC118758.2-201ENST00000614242 2813 ntBASIC11.57□□□□□ -0.56
RNF183Q96D59 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.57□□□□□ -0.56
RNF183Q96D59 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC11.57□□□□□ -0.56
RNF183Q96D59 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
RNF183Q96D59 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC11.57□□□□□ -0.56
RNF183Q96D59 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
RNF183Q96D59 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.57□□□□□ -0.56
RNF183Q96D59 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
RNF183Q96D59 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC11.57□□□□□ -0.56
RNF183Q96D59 AZGP1P1-201ENST00000411909 902 ntBASIC11.57□□□□□ -0.56
RNF183Q96D59 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC11.57□□□□□ -0.56
RNF183Q96D59 NME2P1-201ENST00000426182 414 ntBASIC11.57□□□□□ -0.56
RNF183Q96D59 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC11.57□□□□□ -0.56
RNF183Q96D59 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC11.57□□□□□ -0.56
RNF183Q96D59 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC11.57□□□□□ -0.56
RNF183Q96D59 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC11.57□□□□□ -0.56
RNF183Q96D59 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC11.57□□□□□ -0.56
RNF183Q96D59 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC11.57□□□□□ -0.56
RNF183Q96D59 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC11.57□□□□□ -0.56
RNF183Q96D59 RRP7BP-205ENST00000566851 833 ntBASIC11.57□□□□□ -0.56
RNF183Q96D59 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC11.57□□□□□ -0.56
RNF183Q96D59 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC11.57□□□□□ -0.56
RNF183Q96D59 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
RNF183Q96D59 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
RNF183Q96D59 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.57□□□□□ -0.56
RNF183Q96D59 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 CU639417.3-201ENST00000624240 1404 ntBASIC11.57□□□□□ -0.56
RNF183Q96D59 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
RNF183Q96D59 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC11.57□□□□□ -0.56
RNF183Q96D59 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
RNF183Q96D59 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC11.57□□□□□ -0.56
RNF183Q96D59 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11.57□□□□□ -0.56
RNF183Q96D59 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
RNF183Q96D59 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC11.57□□□□□ -0.56
RNF183Q96D59 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC11.57□□□□□ -0.56
RNF183Q96D59 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RNF183Q96D59 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
RNF183Q96D59 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RNF183Q96D59 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RNF183Q96D59 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC11.56□□□□□ -0.56
RNF183Q96D59 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RNF183Q96D59 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC11.56□□□□□ -0.56
RNF183Q96D59 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RNF183Q96D59 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC11.56□□□□□ -0.56
RNF183Q96D59 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RNF183Q96D59 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RNF183Q96D59 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RNF183Q96D59 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RNF183Q96D59 AC026748.1-201ENST00000624349 3251 ntBASIC11.56□□□□□ -0.56
RNF183Q96D59 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RNF183Q96D59 MARS-233ENST00000628866 2583 ntTSL 5 BASIC11.56□□□□□ -0.56
RNF183Q96D59 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RNF183Q96D59 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
RNF183Q96D59 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RNF183Q96D59 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms