Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.14□□□□□ -0.47
C3orf56Q8N813 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
C3orf56Q8N813 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.14□□□□□ -0.47
C3orf56Q8N813 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
C3orf56Q8N813 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
C3orf56Q8N813 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC12.14□□□□□ -0.47
C3orf56Q8N813 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
C3orf56Q8N813 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
C3orf56Q8N813 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
C3orf56Q8N813 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
C3orf56Q8N813 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.14□□□□□ -0.47
C3orf56Q8N813 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
C3orf56Q8N813 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
C3orf56Q8N813 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
C3orf56Q8N813 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
C3orf56Q8N813 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.14□□□□□ -0.47
C3orf56Q8N813 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
C3orf56Q8N813 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
C3orf56Q8N813 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
C3orf56Q8N813 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 GNE-204ENST00000539208 2190 ntTSL 2 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 AC092978.1-202ENST00000637590 1327 ntBASIC12.13□□□□□ -0.47
C3orf56Q8N813 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 AL450472.2-201ENST00000603663 1156 ntBASIC12.13□□□□□ -0.47
C3orf56Q8N813 AC079336.7-201ENST00000623428 1078 ntBASIC12.13□□□□□ -0.47
C3orf56Q8N813 BX539320.1-201ENST00000623759 877 ntBASIC12.13□□□□□ -0.47
C3orf56Q8N813 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 AL138709.1-201ENST00000614840 1693 ntBASIC12.13□□□□□ -0.47
C3orf56Q8N813 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
C3orf56Q8N813 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
C3orf56Q8N813 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms