Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN22Q8N7P3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
CLDN22Q8N7P3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
CLDN22Q8N7P3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN22Q8N7P3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 REXO1L2P-201ENST00000425429 2069 ntBASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 ACE3P-201ENST00000423435 1973 ntBASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 HIST3H2BA-201ENST00000436555 524 ntBASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 AC023141.5-201ENST00000458585 616 ntBASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 AC009093.7-201ENST00000623853 1223 ntBASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN22Q8N7P3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms