Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PROM2Q8N271 SOD2-202ENST00000367054 815 ntTSL 2 BASIC19.42■□□□□ 0.7
PROM2Q8N271 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PROM2Q8N271 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PROM2Q8N271 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC19.42■□□□□ 0.7
PROM2Q8N271 PFN2-206ENST00000461930 606 ntTSL 4 BASIC19.42■□□□□ 0.7
PROM2Q8N271 AC026410.1-201ENST00000507366 1101 ntBASIC19.42■□□□□ 0.7
PROM2Q8N271 SCARNA21-201ENST00000517026 139 ntBASIC19.42■□□□□ 0.7
PROM2Q8N271 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PROM2Q8N271 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC19.42■□□□□ 0.7
PROM2Q8N271 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC19.42■□□□□ 0.7
PROM2Q8N271 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PROM2Q8N271 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC19.42■□□□□ 0.7
PROM2Q8N271 AC004223.2-201ENST00000590309 544 ntBASIC19.42■□□□□ 0.7
PROM2Q8N271 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC19.42■□□□□ 0.7
PROM2Q8N271 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC19.42■□□□□ 0.7
PROM2Q8N271 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PROM2Q8N271 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.42■□□□□ 0.7
PROM2Q8N271 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.42■□□□□ 0.7
PROM2Q8N271 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PROM2Q8N271 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PROM2Q8N271 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.42■□□□□ 0.7
PROM2Q8N271 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PROM2Q8N271 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PROM2Q8N271 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PROM2Q8N271 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.42■□□□□ 0.7
PROM2Q8N271 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PROM2Q8N271 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PROM2Q8N271 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PROM2Q8N271 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC19.41■□□□□ 0.7
PROM2Q8N271 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PROM2Q8N271 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PROM2Q8N271 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PROM2Q8N271 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PROM2Q8N271 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PROM2Q8N271 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PROM2Q8N271 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PROM2Q8N271 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PROM2Q8N271 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.41■□□□□ 0.7
PROM2Q8N271 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC19.41■□□□□ 0.7
PROM2Q8N271 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PROM2Q8N271 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PROM2Q8N271 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC19.41■□□□□ 0.7
PROM2Q8N271 AC026320.2-201ENST00000434379 478 ntBASIC19.41■□□□□ 0.7
PROM2Q8N271 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC19.41■□□□□ 0.7
PROM2Q8N271 NDUFS6P1-201ENST00000485187 316 ntBASIC19.41■□□□□ 0.7
PROM2Q8N271 NSD1-211ENST00000511258 809 ntTSL 3 BASIC19.41■□□□□ 0.7
PROM2Q8N271 SAMD11P1-201ENST00000571429 661 ntBASIC19.41■□□□□ 0.7
PROM2Q8N271 AC005632.3-201ENST00000605544 308 ntBASIC19.41■□□□□ 0.7
PROM2Q8N271 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PROM2Q8N271 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PROM2Q8N271 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PROM2Q8N271 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.41■□□□□ 0.7
PROM2Q8N271 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC19.41■□□□□ 0.7
PROM2Q8N271 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PROM2Q8N271 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PROM2Q8N271 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.41■□□□□ 0.7
PROM2Q8N271 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PROM2Q8N271 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PROM2Q8N271 AC106820.2-201ENST00000563775 3264 ntBASIC19.41■□□□□ 0.7
PROM2Q8N271 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PROM2Q8N271 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PROM2Q8N271 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PROM2Q8N271 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PROM2Q8N271 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PROM2Q8N271 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PROM2Q8N271 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PROM2Q8N271 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PROM2Q8N271 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PROM2Q8N271 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC19.4■□□□□ 0.7
PROM2Q8N271 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PROM2Q8N271 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC19.4■□□□□ 0.7
PROM2Q8N271 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PROM2Q8N271 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC19.4■□□□□ 0.7
PROM2Q8N271 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC19.4■□□□□ 0.7
PROM2Q8N271 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC19.4■□□□□ 0.7
PROM2Q8N271 AC018463.1-201ENST00000456674 917 ntBASIC19.4■□□□□ 0.7
PROM2Q8N271 RPL18AP3-201ENST00000462885 528 ntBASIC19.4■□□□□ 0.7
PROM2Q8N271 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC19.4■□□□□ 0.7
PROM2Q8N271 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC19.4■□□□□ 0.7
PROM2Q8N271 ALG1L6P-201ENST00000515248 758 ntBASIC19.4■□□□□ 0.7
PROM2Q8N271 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC19.4■□□□□ 0.7
PROM2Q8N271 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PROM2Q8N271 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC19.4■□□□□ 0.7
PROM2Q8N271 AP003392.6-201ENST00000607709 325 ntBASIC19.4■□□□□ 0.7
PROM2Q8N271 RNF146-211ENST00000609447 607 ntTSL 4 BASIC19.4■□□□□ 0.7
PROM2Q8N271 AC002472.3-201ENST00000640124 621 ntBASIC19.4■□□□□ 0.7
PROM2Q8N271 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.4■□□□□ 0.7
PROM2Q8N271 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PROM2Q8N271 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PROM2Q8N271 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PROM2Q8N271 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.39■□□□□ 0.7
PROM2Q8N271 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC19.39■□□□□ 0.7
PROM2Q8N271 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PROM2Q8N271 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PROM2Q8N271 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PROM2Q8N271 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PROM2Q8N271 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PROM2Q8N271 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PROM2Q8N271 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms