Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 AC148477.4-201ENST00000613430 1793 ntBASIC16.66■□□□□ 0.26
HERC6Q8IVU3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.66■□□□□ 0.26
HERC6Q8IVU3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 AC026691.1-201ENST00000602502 2017 ntBASIC16.66■□□□□ 0.26
HERC6Q8IVU3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 ENPP7P14-201ENST00000621765 1040 ntBASIC16.66■□□□□ 0.26
HERC6Q8IVU3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 AL596257.1-201ENST00000641463 2694 ntBASIC16.66■□□□□ 0.26
HERC6Q8IVU3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HERC6Q8IVU3 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 FTLP10-202ENST00000505798 471 ntBASIC16.65■□□□□ 0.26
HERC6Q8IVU3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms