Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 AC114271.1-201ENST00000612689 2813 ntBASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 TMEM198B-204ENST00000484016 896 ntBASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 NPAP1P7-201ENST00000613027 823 ntBASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
LYSMD2Q8IV50 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 AC018442.1-201ENST00000421439 2061 ntBASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 CICP16-201ENST00000502609 2813 ntBASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 SART3-203ENST00000546611 1184 ntBASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 AC069148.1-201ENST00000608741 768 ntBASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 GGTLC5P-201ENST00000617623 998 ntBASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LYSMD2Q8IV50 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LYSMD2Q8IV50 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms