Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 RPL13AP20-201ENST00000459725 609 ntBASIC17.19■□□□□ 0.34
TRIM50Q86XT4 AC108725.1-201ENST00000495472 409 ntBASIC17.19■□□□□ 0.34
TRIM50Q86XT4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 AC008687.7-202ENST00000637404 953 ntBASIC17.19■□□□□ 0.34
TRIM50Q86XT4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 AL513523.2-202ENST00000427283 2040 ntBASIC17.19■□□□□ 0.34
TRIM50Q86XT4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM50Q86XT4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 ECM1P1-201ENST00000604092 1279 ntBASIC17.18■□□□□ 0.34
TRIM50Q86XT4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.18■□□□□ 0.34
TRIM50Q86XT4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 DOC2GP-204ENST00000639052 2548 ntBASIC17.17■□□□□ 0.34
TRIM50Q86XT4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 AC092850.2-201ENST00000623821 2697 ntBASIC17.17■□□□□ 0.34
TRIM50Q86XT4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 ACTBP8-201ENST00000403258 1108 ntBASIC17.17■□□□□ 0.34
TRIM50Q86XT4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 AC079316.1-201ENST00000548397 411 ntBASIC17.17■□□□□ 0.34
TRIM50Q86XT4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.17■□□□□ 0.34
TRIM50Q86XT4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 MIR6869-201ENST00000619434 62 ntBASIC17.17■□□□□ 0.34
TRIM50Q86XT4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM50Q86XT4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 AC026691.1-201ENST00000602502 2017 ntBASIC17.16■□□□□ 0.34
TRIM50Q86XT4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms