Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
CSMD3Q7Z407 RPS15-205ENST00000586686 562 ntTSL 5 BASIC10.51□□□□□ -0.73
CSMD3Q7Z407 RPS15-208ENST00000591804 711 ntTSL 5 BASIC10.51□□□□□ -0.73
CSMD3Q7Z407 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CSMD3Q7Z407 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
CSMD3Q7Z407 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CSMD3Q7Z407 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC10.51□□□□□ -0.73
CSMD3Q7Z407 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
CSMD3Q7Z407 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CSMD3Q7Z407 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CSMD3Q7Z407 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CSMD3Q7Z407 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
CSMD3Q7Z407 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
CSMD3Q7Z407 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 AC008805.1-201ENST00000590892 364 ntBASIC10.5□□□□□ -0.73
CSMD3Q7Z407 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 FAU-202ENST00000434372 533 ntTSL 2 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 AC138696.2-201ENST00000607376 223 ntBASIC10.5□□□□□ -0.73
CSMD3Q7Z407 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 KLF2P1-201ENST00000447438 1042 ntBASIC10.5□□□□□ -0.73
CSMD3Q7Z407 AGPAT5P1-201ENST00000455855 1019 ntBASIC10.5□□□□□ -0.73
CSMD3Q7Z407 AC022616.1-201ENST00000518688 554 ntBASIC10.5□□□□□ -0.73
CSMD3Q7Z407 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CSMD3Q7Z407 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 AK6-201ENST00000380818 1183 ntTSL 2 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 FAM58BP-201ENST00000439056 645 ntBASIC10.49□□□□□ -0.73
CSMD3Q7Z407 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 RPL18AP3-201ENST00000462885 528 ntBASIC10.49□□□□□ -0.73
CSMD3Q7Z407 MRPL22P1-201ENST00000505398 616 ntBASIC10.49□□□□□ -0.73
CSMD3Q7Z407 ALG1L13P-202ENST00000519320 584 ntBASIC10.49□□□□□ -0.73
CSMD3Q7Z407 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 AL603764.1-201ENST00000636452 321 ntBASIC10.49□□□□□ -0.73
CSMD3Q7Z407 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
CSMD3Q7Z407 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms