Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 LINC01165-201ENST00000445190 1623 ntBASIC19.4■□□□□ 0.7
PTF1AQ7RTS3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTF1AQ7RTS3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTF1AQ7RTS3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTF1AQ7RTS3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTF1AQ7RTS3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTF1AQ7RTS3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTF1AQ7RTS3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTF1AQ7RTS3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
PTF1AQ7RTS3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 RBM38-204ENST00000371219 760 ntTSL 2 BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 MIR557-201ENST00000385239 98 ntBASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 FAM58BP-201ENST00000439056 645 ntBASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 RN7SL396P-201ENST00000471086 295 ntBASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 MRPL22P1-201ENST00000505398 616 ntBASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 CMC2-224ENST00000630396 481 ntTSL 5 BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 AL137783.1-201ENST00000623494 1896 ntBASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTF1AQ7RTS3 PCDH8P1-201ENST00000428983 2773 ntBASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 LINC02199-201ENST00000506655 2702 ntBASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 CCNC-217ENST00000523985 958 ntTSL 2 BASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 CYP4F23P-201ENST00000593402 1579 ntBASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 AL360270.3-201ENST00000609118 1348 ntBASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 AC006058.4-201ENST00000624016 1670 ntBASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTF1AQ7RTS3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 HIST2H2BA-201ENST00000412169 381 ntBASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 AP000358.1-201ENST00000456260 156 ntBASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 RNF146-211ENST00000609447 607 ntTSL 4 BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 AP001527.2-201ENST00000614441 631 ntBASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 CASP16P-204ENST00000635032 809 ntBASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms