Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 PAM16-211ENST00000575848 518 ntTSL 3 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 AL157813.1-201ENST00000612996 587 ntBASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 AL139384.1-201ENST00000612143 3047 ntBASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 AC006480.2-201ENST00000609770 1337 ntBASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 AC012441.2-201ENST00000444843 739 ntBASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 AC019193.1-201ENST00000506678 823 ntBASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC141Q6ZP82 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 RTN3P1-201ENST00000536295 711 ntBASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 AC008805.1-201ENST00000590892 364 ntBASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 AC006453.1-201ENST00000636037 1257 ntBASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 NAP1L6-202ENST00000641404 1222 ntBASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 MVK-214ENST00000629016 1591 ntTSL 5 BASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC22.53■■□□□ 1.2
CCDC141Q6ZP82 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 LILRP1-201ENST00000444199 1370 ntBASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 LBH-202ENST00000401506 485 ntTSL 3 BASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 RPL17P11-201ENST00000417593 544 ntBASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 AL645933.1-201ENST00000440087 609 ntBASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 AC008267.1-201ENST00000474858 1069 ntBASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 IRF3-215ENST00000596822 823 ntTSL 3 BASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 MIR6720-201ENST00000611664 98 ntBASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCDC141Q6ZP82 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
CCDC141Q6ZP82 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC22.52■■□□□ 1.19
CCDC141Q6ZP82 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC22.51■■□□□ 1.19
CCDC141Q6ZP82 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms