Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 PCED1CP-201ENST00000419887 785 ntBASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 TSSC2-201ENST00000450217 709 ntBASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 AC091076.1-201ENST00000610741 619 ntBASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 AP001282.1-201ENST00000531301 1499 ntBASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP4Q6PIL6 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 AC092053.3-201ENST00000641308 4975 ntBASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 ARMC10P1-201ENST00000313754 855 ntBASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 AL031133.1-201ENST00000406807 723 ntBASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 RN7SL606P-201ENST00000472779 293 ntBASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms