Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 ZNF767P-206ENST00000513792 565 ntBASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 AC006453.4-201ENST00000636949 1252 ntBASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 AC010491.1-201ENST00000563101 2797 ntBASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 AC127383.1-201ENST00000444697 1800 ntBASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC62Q6P9F0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 PFN1P12-201ENST00000455938 534 ntBASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC62Q6P9F0 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 AL645937.2-201ENST00000396808 931 ntBASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 AL139094.1-201ENST00000405549 1188 ntBASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 RN7SL48P-201ENST00000579283 293 ntBASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 AL645728.2-202ENST00000641679 227 ntBASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms