Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 UXT-AS1-201ENST00000590504 1525 ntBASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 MIR1233-2-201ENST00000408138 82 ntBASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 MIR1233-1-201ENST00000408722 82 ntBASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 AC243562.1-201ENST00000560672 389 ntBASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 AC073389.1-201ENST00000595595 795 ntBASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 AL365330.1-201ENST00000607459 531 ntBASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM53Q6P2H8 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 AC097376.2-205ENST00000610159 5334 ntBASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 PPT1-213ENST00000641319 2388 ntBASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 AC005237.2-201ENST00000434368 219 ntBASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 AP000344.2-201ENST00000512987 629 ntBASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 SPTSSB-204ENST00000617024 1292 ntBASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM53Q6P2H8 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 CICP16-201ENST00000502609 2813 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms