Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 ANKRD19P-201ENST00000338192 862 ntBASIC21.18■□□□□ 0.98
CDCA8Q53HL2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 CD8B2-202ENST00000417670 633 ntBASIC21.18■□□□□ 0.98
CDCA8Q53HL2 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 AC119751.2-201ENST00000504529 210 ntBASIC21.18■□□□□ 0.98
CDCA8Q53HL2 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 RPL8-205ENST00000527914 551 ntTSL 3 BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 DUX4L47-201ENST00000566374 394 ntBASIC21.18■□□□□ 0.98
CDCA8Q53HL2 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 PAUPAR-201ENST00000630360 2965 ntBASIC21.18■□□□□ 0.98
CDCA8Q53HL2 RHOXF1P1-202ENST00000635473 501 ntBASIC21.18■□□□□ 0.98
CDCA8Q53HL2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDCA8Q53HL2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 MPV17-206ENST00000402722 827 ntTSL 3 BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 KRT223P-202ENST00000449164 1292 ntBASIC21.17■□□□□ 0.98
CDCA8Q53HL2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 AC244669.2-201ENST00000612320 853 ntBASIC21.17■□□□□ 0.98
CDCA8Q53HL2 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 AC022532.1-201ENST00000624563 1728 ntBASIC21.17■□□□□ 0.98
CDCA8Q53HL2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDCA8Q53HL2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 WASH3P-207ENST00000560956 1394 ntBASIC21.16■□□□□ 0.98
CDCA8Q53HL2 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 EIF3FP3-201ENST00000434851 1086 ntBASIC21.16■□□□□ 0.98
CDCA8Q53HL2 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 RNA5SP486-201ENST00000515961 83 ntBASIC21.16■□□□□ 0.98
CDCA8Q53HL2 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDCA8Q53HL2 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms