Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 AC190387.1-201ENST00000551683 408 ntBASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 AC007431.3-201ENST00000623221 587 ntBASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 INTS4P2-202ENST00000614726 2019 ntBASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 AL391825.1-201ENST00000457671 1364 ntBASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN20Q4JDL3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 AL353779.1-201ENST00000434793 351 ntBASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 WASH4P-201ENST00000564273 1246 ntBASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN20Q4JDL3 AC012508.2-201ENST00000567613 1472 ntBASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 AC093525.8-201ENST00000624099 1342 ntBASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 ACE3P-201ENST00000423435 1973 ntBASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 AC007787.1-201ENST00000588095 1583 ntBASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 AL138799.1-201ENST00000448213 1675 ntBASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPN20Q4JDL3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms