Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CGNL1Q0VF96 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CGNL1Q0VF96 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC20.84■□□□□ 0.93
CGNL1Q0VF96 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CGNL1Q0VF96 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CGNL1Q0VF96 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
CGNL1Q0VF96 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CGNL1Q0VF96 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CGNL1Q0VF96 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CGNL1Q0VF96 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CGNL1Q0VF96 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CGNL1Q0VF96 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CGNL1Q0VF96 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CGNL1Q0VF96 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CGNL1Q0VF96 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CGNL1Q0VF96 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CGNL1Q0VF96 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CGNL1Q0VF96 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CGNL1Q0VF96 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CGNL1Q0VF96 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
CGNL1Q0VF96 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CGNL1Q0VF96 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC20.83■□□□□ 0.93
CGNL1Q0VF96 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CGNL1Q0VF96 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CGNL1Q0VF96 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
CGNL1Q0VF96 AL590640.2-201ENST00000457038 527 ntBASIC20.83■□□□□ 0.93
CGNL1Q0VF96 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC20.83■□□□□ 0.93
CGNL1Q0VF96 RNA5SP486-201ENST00000515961 83 ntBASIC20.83■□□□□ 0.93
CGNL1Q0VF96 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC20.83■□□□□ 0.93
CGNL1Q0VF96 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CGNL1Q0VF96 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC20.83■□□□□ 0.93
CGNL1Q0VF96 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CGNL1Q0VF96 AC008687.7-202ENST00000637404 953 ntBASIC20.83■□□□□ 0.93
CGNL1Q0VF96 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CGNL1Q0VF96 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CGNL1Q0VF96 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CGNL1Q0VF96 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CGNL1Q0VF96 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC20.83■□□□□ 0.93
CGNL1Q0VF96 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CGNL1Q0VF96 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC20.83■□□□□ 0.93
CGNL1Q0VF96 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.83■□□□□ 0.93
CGNL1Q0VF96 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CGNL1Q0VF96 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CGNL1Q0VF96 REXO1L4P-201ENST00000605109 1937 ntBASIC20.83■□□□□ 0.92
CGNL1Q0VF96 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC20.83■□□□□ 0.92
CGNL1Q0VF96 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC20.83■□□□□ 0.92
CGNL1Q0VF96 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
CGNL1Q0VF96 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC20.83■□□□□ 0.92
CGNL1Q0VF96 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CGNL1Q0VF96 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 AHRR-211ENST00000515206 462 ntTSL 5 BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 CD74-212ENST00000524315 584 ntTSL 5 BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 ETV2-208ENST00000621247 941 ntTSL 5 BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 AC112693.3-201ENST00000624819 1983 ntBASIC20.82■□□□□ 0.92
CGNL1Q0VF96 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CGNL1Q0VF96 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC20.81■□□□□ 0.92
CGNL1Q0VF96 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CGNL1Q0VF96 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CGNL1Q0VF96 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CGNL1Q0VF96 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CGNL1Q0VF96 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CGNL1Q0VF96 BRWD1P1-201ENST00000401091 371 ntBASIC20.81■□□□□ 0.92
CGNL1Q0VF96 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC20.81■□□□□ 0.92
CGNL1Q0VF96 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC20.81■□□□□ 0.92
CGNL1Q0VF96 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC20.81■□□□□ 0.92
CGNL1Q0VF96 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC20.81■□□□□ 0.92
CGNL1Q0VF96 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC20.81■□□□□ 0.92
CGNL1Q0VF96 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC20.81■□□□□ 0.92
CGNL1Q0VF96 AC022616.1-201ENST00000518688 554 ntBASIC20.81■□□□□ 0.92
CGNL1Q0VF96 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CGNL1Q0VF96 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC20.81■□□□□ 0.92
CGNL1Q0VF96 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CGNL1Q0VF96 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC20.81■□□□□ 0.92
CGNL1Q0VF96 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CGNL1Q0VF96 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC20.81■□□□□ 0.92
CGNL1Q0VF96 AL603764.1-201ENST00000636452 321 ntBASIC20.81■□□□□ 0.92
CGNL1Q0VF96 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
CGNL1Q0VF96 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CGNL1Q0VF96 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC20.81■□□□□ 0.92
CGNL1Q0VF96 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms