Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.96■□□□□ 0.31
KCNA1Q09470 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.96■□□□□ 0.31
KCNA1Q09470 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KCNA1Q09470 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.96■□□□□ 0.31
KCNA1Q09470 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KCNA1Q09470 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KCNA1Q09470 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KCNA1Q09470 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.96■□□□□ 0.31
KCNA1Q09470 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.96■□□□□ 0.31
KCNA1Q09470 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KCNA1Q09470 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.96■□□□□ 0.31
KCNA1Q09470 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.96■□□□□ 0.31
KCNA1Q09470 AC087499.6-201ENST00000411576 835 ntBASIC16.96■□□□□ 0.31
KCNA1Q09470 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KCNA1Q09470 GHSR-202ENST00000427970 912 ntBASIC16.96■□□□□ 0.31
KCNA1Q09470 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.96■□□□□ 0.31
KCNA1Q09470 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KCNA1Q09470 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.96■□□□□ 0.31
KCNA1Q09470 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.96■□□□□ 0.31
KCNA1Q09470 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.96■□□□□ 0.31
KCNA1Q09470 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.96■□□□□ 0.31
KCNA1Q09470 AL359711.2-201ENST00000563105 872 ntBASIC16.96■□□□□ 0.31
KCNA1Q09470 TP53TG3HP-202ENST00000569755 579 ntBASIC16.96■□□□□ 0.31
KCNA1Q09470 MIR3197-201ENST00000582241 73 ntBASIC16.96■□□□□ 0.31
KCNA1Q09470 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
KCNA1Q09470 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KCNA1Q09470 MROH4P-201ENST00000431302 1578 ntBASIC16.96■□□□□ 0.31
KCNA1Q09470 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.96■□□□□ 0.31
KCNA1Q09470 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
KCNA1Q09470 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KCNA1Q09470 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
KCNA1Q09470 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
KCNA1Q09470 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KCNA1Q09470 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
KCNA1Q09470 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.96■□□□□ 0.31
KCNA1Q09470 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KCNA1Q09470 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
KCNA1Q09470 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
KCNA1Q09470 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.96■□□□□ 0.3
KCNA1Q09470 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
KCNA1Q09470 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
KCNA1Q09470 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
KCNA1Q09470 REXO1L4P-201ENST00000605109 1937 ntBASIC16.96■□□□□ 0.3
KCNA1Q09470 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.95■□□□□ 0.3
KCNA1Q09470 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KCNA1Q09470 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
KCNA1Q09470 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KCNA1Q09470 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KCNA1Q09470 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
KCNA1Q09470 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KCNA1Q09470 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KCNA1Q09470 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
KCNA1Q09470 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KCNA1Q09470 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
KCNA1Q09470 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KCNA1Q09470 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KCNA1Q09470 AC104457.1-201ENST00000401024 814 ntBASIC16.95■□□□□ 0.3
KCNA1Q09470 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KCNA1Q09470 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.95■□□□□ 0.3
KCNA1Q09470 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.95■□□□□ 0.3
KCNA1Q09470 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.95■□□□□ 0.3
KCNA1Q09470 AC140912.1-201ENST00000577171 1054 ntBASIC16.95■□□□□ 0.3
KCNA1Q09470 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.95■□□□□ 0.3
KCNA1Q09470 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
KCNA1Q09470 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.95■□□□□ 0.3
KCNA1Q09470 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.95■□□□□ 0.3
KCNA1Q09470 TMEM261P1-201ENST00000604899 340 ntBASIC16.95■□□□□ 0.3
KCNA1Q09470 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.95■□□□□ 0.3
KCNA1Q09470 INTS4P2-202ENST00000614726 2019 ntBASIC16.95■□□□□ 0.3
KCNA1Q09470 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
KCNA1Q09470 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
KCNA1Q09470 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KCNA1Q09470 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.95■□□□□ 0.3
KCNA1Q09470 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
KCNA1Q09470 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.95■□□□□ 0.3
KCNA1Q09470 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
KCNA1Q09470 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
KCNA1Q09470 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KCNA1Q09470 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.95■□□□□ 0.3
KCNA1Q09470 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KCNA1Q09470 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.95■□□□□ 0.3
KCNA1Q09470 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
KCNA1Q09470 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KCNA1Q09470 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KCNA1Q09470 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KCNA1Q09470 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KCNA1Q09470 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KCNA1Q09470 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KCNA1Q09470 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.94■□□□□ 0.3
KCNA1Q09470 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KCNA1Q09470 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KCNA1Q09470 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KCNA1Q09470 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.94■□□□□ 0.3
KCNA1Q09470 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KCNA1Q09470 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KCNA1Q09470 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KCNA1Q09470 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KCNA1Q09470 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KCNA1Q09470 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KCNA1Q09470 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms