Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.01□□□□□ -0.17
SLC3A1Q07837 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
SLC3A1Q07837 AC023141.5-201ENST00000458585 616 ntBASIC14.01□□□□□ -0.17
SLC3A1Q07837 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.01□□□□□ -0.17
SLC3A1Q07837 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.01□□□□□ -0.17
SLC3A1Q07837 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.01□□□□□ -0.17
SLC3A1Q07837 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.01□□□□□ -0.17
SLC3A1Q07837 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.01□□□□□ -0.17
SLC3A1Q07837 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SLC3A1Q07837 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.01□□□□□ -0.17
SLC3A1Q07837 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC3A1Q07837 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC3A1Q07837 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC3A1Q07837 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC3A1Q07837 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SLC3A1Q07837 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SLC3A1Q07837 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC3A1Q07837 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
SLC3A1Q07837 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC3A1Q07837 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC3A1Q07837 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC3A1Q07837 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC3A1Q07837 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC3A1Q07837 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC3A1Q07837 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC3A1Q07837 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
SLC3A1Q07837 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC3A1Q07837 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC3A1Q07837 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.01□□□□□ -0.17
SLC3A1Q07837 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC3A1Q07837 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC3A1Q07837 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SLC3A1Q07837 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14□□□□□ -0.17
SLC3A1Q07837 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14□□□□□ -0.17
SLC3A1Q07837 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14□□□□□ -0.17
SLC3A1Q07837 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
SLC3A1Q07837 AC005912.2-201ENST00000619492 2400 ntBASIC14□□□□□ -0.17
SLC3A1Q07837 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 KRT18P28-201ENST00000453838 1332 ntBASIC14□□□□□ -0.17
SLC3A1Q07837 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
SLC3A1Q07837 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14□□□□□ -0.17
SLC3A1Q07837 AC079140.1-201ENST00000508039 487 ntBASIC14□□□□□ -0.17
SLC3A1Q07837 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14□□□□□ -0.17
SLC3A1Q07837 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14□□□□□ -0.17
SLC3A1Q07837 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
SLC3A1Q07837 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14□□□□□ -0.17
SLC3A1Q07837 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SLC3A1Q07837 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14□□□□□ -0.17
SLC3A1Q07837 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SLC3A1Q07837 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14□□□□□ -0.17
SLC3A1Q07837 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14□□□□□ -0.17
SLC3A1Q07837 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
SLC3A1Q07837 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14□□□□□ -0.17
SLC3A1Q07837 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14□□□□□ -0.17
SLC3A1Q07837 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14□□□□□ -0.17
SLC3A1Q07837 AJ011931.1-201ENST00000618749 2492 ntBASIC14□□□□□ -0.17
SLC3A1Q07837 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14□□□□□ -0.17
SLC3A1Q07837 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SLC3A1Q07837 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLC3A1Q07837 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC3A1Q07837 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC3A1Q07837 AL691432.1-201ENST00000596308 1422 ntBASIC13.99□□□□□ -0.17
SLC3A1Q07837 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC3A1Q07837 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SLC3A1Q07837 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC3A1Q07837 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC3A1Q07837 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC3A1Q07837 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SLC3A1Q07837 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SLC3A1Q07837 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.99□□□□□ -0.17
SLC3A1Q07837 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC3A1Q07837 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC3A1Q07837 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SLC3A1Q07837 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.99□□□□□ -0.17
SLC3A1Q07837 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms