Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN7AQ01118 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCN7AQ01118 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCN7AQ01118 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN7AQ01118 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC18.76■□□□□ 0.59
SCN7AQ01118 AC012441.2-201ENST00000444843 739 ntBASIC18.76■□□□□ 0.59
SCN7AQ01118 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.76■□□□□ 0.59
SCN7AQ01118 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SCN7AQ01118 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN7AQ01118 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC18.76■□□□□ 0.59
SCN7AQ01118 AC026691.1-201ENST00000602502 2017 ntBASIC18.76■□□□□ 0.59
SCN7AQ01118 AL109837.1-201ENST00000603272 613 ntBASIC18.76■□□□□ 0.59
SCN7AQ01118 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
SCN7AQ01118 AL590440.2-201ENST00000641973 1595 ntBASIC18.76■□□□□ 0.59
SCN7AQ01118 AC023090.2-201ENST00000625182 2110 ntBASIC18.76■□□□□ 0.59
SCN7AQ01118 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCN7AQ01118 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN7AQ01118 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN7AQ01118 AC084018.2-201ENST00000613093 2607 ntBASIC18.76■□□□□ 0.59
SCN7AQ01118 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN7AQ01118 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN7AQ01118 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.76■□□□□ 0.59
SCN7AQ01118 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN7AQ01118 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN7AQ01118 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SCN7AQ01118 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.76■□□□□ 0.59
SCN7AQ01118 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN7AQ01118 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SCN7AQ01118 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC18.76■□□□□ 0.59
SCN7AQ01118 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC18.76■□□□□ 0.59
SCN7AQ01118 CFL1-206ENST00000527344 962 ntTSL 2 BASIC18.76■□□□□ 0.59
SCN7AQ01118 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC18.76■□□□□ 0.59
SCN7AQ01118 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC18.76■□□□□ 0.59
SCN7AQ01118 AC073352.2-201ENST00000609385 439 ntBASIC18.76■□□□□ 0.59
SCN7AQ01118 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCN7AQ01118 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SCN7AQ01118 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.75■□□□□ 0.59
SCN7AQ01118 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.75■□□□□ 0.59
SCN7AQ01118 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SCN7AQ01118 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SCN7AQ01118 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN7AQ01118 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SCN7AQ01118 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
SCN7AQ01118 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.75■□□□□ 0.59
SCN7AQ01118 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SCN7AQ01118 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC18.75■□□□□ 0.59
SCN7AQ01118 CTBP2P4-201ENST00000513884 920 ntBASIC18.75■□□□□ 0.59
SCN7AQ01118 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
SCN7AQ01118 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
SCN7AQ01118 AC131206.1-201ENST00000538078 1211 ntBASIC18.75■□□□□ 0.59
SCN7AQ01118 RPL17P45-201ENST00000586289 509 ntBASIC18.75■□□□□ 0.59
SCN7AQ01118 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
SCN7AQ01118 WDR7-208ENST00000589935 544 ntTSL 4 BASIC18.75■□□□□ 0.59
SCN7AQ01118 AL805961.1-201ENST00000642026 753 ntBASIC18.75■□□□□ 0.59
SCN7AQ01118 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN7AQ01118 LILRP1-201ENST00000444199 1370 ntBASIC18.75■□□□□ 0.59
SCN7AQ01118 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN7AQ01118 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SCN7AQ01118 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SCN7AQ01118 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
SCN7AQ01118 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SCN7AQ01118 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.74■□□□□ 0.59
SCN7AQ01118 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCN7AQ01118 RNA5SP359-201ENST00000364838 113 ntBASIC18.74■□□□□ 0.59
SCN7AQ01118 AC026316.1-201ENST00000398900 414 ntBASIC18.74■□□□□ 0.59
SCN7AQ01118 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC18.74■□□□□ 0.59
SCN7AQ01118 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC18.74■□□□□ 0.59
SCN7AQ01118 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.74■□□□□ 0.59
SCN7AQ01118 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC18.74■□□□□ 0.59
SCN7AQ01118 NAT9-211ENST00000580632 799 ntTSL 3 BASIC18.74■□□□□ 0.59
SCN7AQ01118 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC18.74■□□□□ 0.59
SCN7AQ01118 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.74■□□□□ 0.59
SCN7AQ01118 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC18.74■□□□□ 0.59
SCN7AQ01118 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.74■□□□□ 0.59
SCN7AQ01118 ZBED1P1-201ENST00000502364 1930 ntBASIC18.74■□□□□ 0.59
SCN7AQ01118 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCN7AQ01118 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SCN7AQ01118 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SCN7AQ01118 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCN7AQ01118 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCN7AQ01118 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCN7AQ01118 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.74■□□□□ 0.59
SCN7AQ01118 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCN7AQ01118 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCN7AQ01118 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.73■□□□□ 0.59
SCN7AQ01118 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCN7AQ01118 AP000845.1-201ENST00000581677 2131 ntBASIC18.73■□□□□ 0.59
SCN7AQ01118 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCN7AQ01118 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SCN7AQ01118 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCN7AQ01118 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCN7AQ01118 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCN7AQ01118 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC18.73■□□□□ 0.59
SCN7AQ01118 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC18.73■□□□□ 0.59
SCN7AQ01118 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCN7AQ01118 OR2R1P-201ENST00000441404 914 ntBASIC18.73■□□□□ 0.59
SCN7AQ01118 PUDPP3-201ENST00000445368 636 ntBASIC18.73■□□□□ 0.59
SCN7AQ01118 CICP12-201ENST00000455801 843 ntBASIC18.73■□□□□ 0.59
SCN7AQ01118 RN7SL8P-201ENST00000461771 266 ntBASIC18.73■□□□□ 0.59
SCN7AQ01118 SCARNA21-201ENST00000517026 139 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms