Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDK5Q00535 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.96□□□□□ -0.17
CDK5Q00535 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDK5Q00535 AC005840.4-201ENST00000541242 2494 ntBASIC13.96□□□□□ -0.17
CDK5Q00535 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDK5Q00535 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
CDK5Q00535 AP001267.2-201ENST00000532619 2086 ntBASIC13.96□□□□□ -0.17
CDK5Q00535 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CDK5Q00535 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.96□□□□□ -0.17
CDK5Q00535 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDK5Q00535 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDK5Q00535 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
CDK5Q00535 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDK5Q00535 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CDK5Q00535 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDK5Q00535 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.96□□□□□ -0.17
CDK5Q00535 SLED1-202ENST00000512051 380 ntBASIC13.96□□□□□ -0.17
CDK5Q00535 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.96□□□□□ -0.17
CDK5Q00535 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.96□□□□□ -0.17
CDK5Q00535 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.96□□□□□ -0.17
CDK5Q00535 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.96□□□□□ -0.17
CDK5Q00535 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CDK5Q00535 RN7SL828P-201ENST00000607615 303 ntBASIC13.96□□□□□ -0.17
CDK5Q00535 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDK5Q00535 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDK5Q00535 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDK5Q00535 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.96□□□□□ -0.17
CDK5Q00535 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.96□□□□□ -0.17
CDK5Q00535 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.96□□□□□ -0.17
CDK5Q00535 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CDK5Q00535 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDK5Q00535 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDK5Q00535 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.96□□□□□ -0.17
CDK5Q00535 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDK5Q00535 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.96□□□□□ -0.18
CDK5Q00535 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.96□□□□□ -0.18
CDK5Q00535 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CDK5Q00535 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CDK5Q00535 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.96□□□□□ -0.18
CDK5Q00535 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CDK5Q00535 AC117489.1-201ENST00000625169 3217 ntBASIC13.96□□□□□ -0.18
CDK5Q00535 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CDK5Q00535 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CDK5Q00535 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDK5Q00535 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.96□□□□□ -0.18
CDK5Q00535 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CDK5Q00535 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.95□□□□□ -0.18
CDK5Q00535 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CDK5Q00535 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDK5Q00535 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDK5Q00535 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDK5Q00535 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CDK5Q00535 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CDK5Q00535 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.95□□□□□ -0.18
CDK5Q00535 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDK5Q00535 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CDK5Q00535 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDK5Q00535 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.95□□□□□ -0.18
CDK5Q00535 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.95□□□□□ -0.18
CDK5Q00535 AC138969.3-201ENST00000546612 1459 ntBASIC13.95□□□□□ -0.18
CDK5Q00535 AC138932.2-201ENST00000548268 1459 ntBASIC13.95□□□□□ -0.18
CDK5Q00535 AC126755.4-201ENST00000549796 1459 ntBASIC13.95□□□□□ -0.18
CDK5Q00535 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
CDK5Q00535 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDK5Q00535 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDK5Q00535 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDK5Q00535 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDK5Q00535 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDK5Q00535 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDK5Q00535 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.95□□□□□ -0.18
CDK5Q00535 MKNK2P1-201ENST00000437526 628 ntBASIC13.95□□□□□ -0.18
CDK5Q00535 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CDK5Q00535 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.95□□□□□ -0.18
CDK5Q00535 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.95□□□□□ -0.18
CDK5Q00535 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.95□□□□□ -0.18
CDK5Q00535 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.95□□□□□ -0.18
CDK5Q00535 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.95□□□□□ -0.18
CDK5Q00535 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.95□□□□□ -0.18
CDK5Q00535 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.95□□□□□ -0.18
CDK5Q00535 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDK5Q00535 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.95□□□□□ -0.18
CDK5Q00535 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.95□□□□□ -0.18
CDK5Q00535 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDK5Q00535 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.95□□□□□ -0.18
CDK5Q00535 AC007787.1-201ENST00000588095 1583 ntBASIC13.95□□□□□ -0.18
CDK5Q00535 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CDK5Q00535 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDK5Q00535 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.95□□□□□ -0.18
CDK5Q00535 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDK5Q00535 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.95□□□□□ -0.18
CDK5Q00535 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.95□□□□□ -0.18
CDK5Q00535 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDK5Q00535 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDK5Q00535 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDK5Q00535 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDK5Q00535 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.94□□□□□ -0.18
CDK5Q00535 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CDK5Q00535 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDK5Q00535 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDK5Q00535 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms