Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 SLC7A15P-201ENST00000424028 1363 ntBASIC15.07■□□□□ 0
YBX1P67809 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.07■□□□□ 0
YBX1P67809 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 AL390755.1-201ENST00000623716 2027 ntBASIC15.07■□□□□ 0
YBX1P67809 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 AC232323.1-201ENST00000540724 2099 ntBASIC15.07■□□□□ 0
YBX1P67809 REXO1L5P-201ENST00000622260 2098 ntBASIC15.07■□□□□ 0
YBX1P67809 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.07■□□□□ 0
YBX1P67809 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
YBX1P67809 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.07■□□□□ 0
YBX1P67809 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.07■□□□□ 0
YBX1P67809 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
YBX1P67809 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
YBX1P67809 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
YBX1P67809 AC005089.1-201ENST00000619486 2241 ntBASIC15.07■□□□□ 0
YBX1P67809 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
YBX1P67809 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
YBX1P67809 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
YBX1P67809 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.06■□□□□ 0
YBX1P67809 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.06■□□□□ 0
YBX1P67809 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
YBX1P67809 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.06■□□□□ 0
YBX1P67809 AC117489.1-201ENST00000625169 3217 ntBASIC15.06■□□□□ 0
YBX1P67809 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
YBX1P67809 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
YBX1P67809 AC007292.2-201ENST00000593524 1812 ntBASIC15.06■□□□□ 0
YBX1P67809 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
YBX1P67809 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.06■□□□□ 0
YBX1P67809 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.06■□□□□ 0
YBX1P67809 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.06■□□□□ 0
YBX1P67809 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.06■□□□□ 0
YBX1P67809 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
YBX1P67809 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
YBX1P67809 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.06■□□□□ 0
YBX1P67809 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.06■□□□□ 0
YBX1P67809 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.06■□□□□ 0
YBX1P67809 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.06■□□□□ 0
YBX1P67809 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
YBX1P67809 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
YBX1P67809 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.06■□□□□ 0
YBX1P67809 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.06■□□□□ 0
YBX1P67809 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.06■□□□□ 0
YBX1P67809 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.06■□□□□ 0
YBX1P67809 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
YBX1P67809 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.06■□□□□ 0
YBX1P67809 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
YBX1P67809 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
YBX1P67809 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.06■□□□□ 0
YBX1P67809 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.06■□□□□ 0
YBX1P67809 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
YBX1P67809 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
YBX1P67809 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.06■□□□□ 0
YBX1P67809 AC126365.1-201ENST00000578585 1514 ntBASIC15.06■□□□□ 0
YBX1P67809 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
YBX1P67809 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.06■□□□□ 0
YBX1P67809 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
YBX1P67809 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.06■□□□□ 0
YBX1P67809 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
YBX1P67809 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
YBX1P67809 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.06■□□□□ 0
YBX1P67809 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
YBX1P67809 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.06■□□□□ 0
YBX1P67809 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.06■□□□□ 0
YBX1P67809 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
YBX1P67809 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
YBX1P67809 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
YBX1P67809 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
YBX1P67809 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
YBX1P67809 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.05■□□□□ 0
YBX1P67809 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
YBX1P67809 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
YBX1P67809 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
YBX1P67809 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
YBX1P67809 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.05■□□□□ -0
YBX1P67809 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
YBX1P67809 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.05■□□□□ -0
YBX1P67809 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
YBX1P67809 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.05■□□□□ -0
YBX1P67809 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
YBX1P67809 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.05■□□□□ -0
YBX1P67809 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.05■□□□□ -0
YBX1P67809 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
YBX1P67809 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.05■□□□□ -0
YBX1P67809 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.05■□□□□ -0
YBX1P67809 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.05■□□□□ -0
YBX1P67809 RARRES2P5-201ENST00000564013 466 ntBASIC15.05■□□□□ -0
YBX1P67809 WASH4P-201ENST00000564273 1246 ntBASIC15.05■□□□□ -0
YBX1P67809 AC015910.1-201ENST00000579400 975 ntBASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms