Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.52□□□□□ -0.25
FOXG1P55316 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.52□□□□□ -0.25
FOXG1P55316 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.52□□□□□ -0.25
FOXG1P55316 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.52□□□□□ -0.25
FOXG1P55316 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.52□□□□□ -0.25
FOXG1P55316 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.52□□□□□ -0.25
FOXG1P55316 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.52□□□□□ -0.25
FOXG1P55316 AC093525.8-201ENST00000624099 1342 ntBASIC13.52□□□□□ -0.25
FOXG1P55316 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
FOXG1P55316 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXG1P55316 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
FOXG1P55316 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.52□□□□□ -0.25
FOXG1P55316 AC148477.4-201ENST00000613430 1793 ntBASIC13.52□□□□□ -0.25
FOXG1P55316 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXG1P55316 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXG1P55316 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXG1P55316 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXG1P55316 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.52□□□□□ -0.25
FOXG1P55316 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
FOXG1P55316 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXG1P55316 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.52□□□□□ -0.25
FOXG1P55316 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXG1P55316 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.52□□□□□ -0.25
FOXG1P55316 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.52□□□□□ -0.25
FOXG1P55316 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXG1P55316 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
FOXG1P55316 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXG1P55316 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.52□□□□□ -0.25
FOXG1P55316 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.52□□□□□ -0.25
FOXG1P55316 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXG1P55316 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXG1P55316 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
FOXG1P55316 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.51□□□□□ -0.25
FOXG1P55316 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
FOXG1P55316 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
FOXG1P55316 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
FOXG1P55316 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.51□□□□□ -0.25
FOXG1P55316 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.51□□□□□ -0.25
FOXG1P55316 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.51□□□□□ -0.25
FOXG1P55316 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.51□□□□□ -0.25
FOXG1P55316 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
FOXG1P55316 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 RNU1-114P-201ENST00000365297 166 ntBASIC13.51□□□□□ -0.25
FOXG1P55316 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.51□□□□□ -0.25
FOXG1P55316 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.51□□□□□ -0.25
FOXG1P55316 AC079776.1-201ENST00000401540 1152 ntBASIC13.51□□□□□ -0.25
FOXG1P55316 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 AC112492.5-201ENST00000421897 457 ntBASIC13.51□□□□□ -0.25
FOXG1P55316 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.51□□□□□ -0.25
FOXG1P55316 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.51□□□□□ -0.25
FOXG1P55316 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.51□□□□□ -0.25
FOXG1P55316 SLC25A47P1-201ENST00000531577 414 ntBASIC13.51□□□□□ -0.25
FOXG1P55316 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.51□□□□□ -0.25
FOXG1P55316 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.51□□□□□ -0.25
FOXG1P55316 AP001063.1-201ENST00000568332 529 ntBASIC13.51□□□□□ -0.25
FOXG1P55316 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.51□□□□□ -0.25
FOXG1P55316 SAMD11P1-201ENST00000571429 661 ntBASIC13.51□□□□□ -0.25
FOXG1P55316 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.51□□□□□ -0.25
FOXG1P55316 BX539320.1-201ENST00000623759 877 ntBASIC13.51□□□□□ -0.25
FOXG1P55316 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.51□□□□□ -0.25
FOXG1P55316 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXG1P55316 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXG1P55316 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
FOXG1P55316 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
FOXG1P55316 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
FOXG1P55316 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
FOXG1P55316 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
FOXG1P55316 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
FOXG1P55316 AL158070.2-201ENST00000623713 1621 ntBASIC13.5□□□□□ -0.25
FOXG1P55316 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.5□□□□□ -0.25
FOXG1P55316 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXG1P55316 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms