Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EFNA3P52797 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.44□□□□□ -0.1
EFNA3P52797 AC134312.5-201ENST00000568031 1313 ntBASIC14.44□□□□□ -0.1
EFNA3P52797 AC093525.8-201ENST00000624099 1342 ntBASIC14.44□□□□□ -0.1
EFNA3P52797 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EFNA3P52797 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EFNA3P52797 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EFNA3P52797 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.44□□□□□ -0.1
EFNA3P52797 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.44□□□□□ -0.1
EFNA3P52797 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EFNA3P52797 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
EFNA3P52797 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EFNA3P52797 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EFNA3P52797 RNU1-114P-201ENST00000365297 166 ntBASIC14.44□□□□□ -0.1
EFNA3P52797 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
EFNA3P52797 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
EFNA3P52797 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.44□□□□□ -0.1
EFNA3P52797 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.44□□□□□ -0.1
EFNA3P52797 AC007274.1-201ENST00000439805 662 ntBASIC14.44□□□□□ -0.1
EFNA3P52797 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.44□□□□□ -0.1
EFNA3P52797 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.44□□□□□ -0.1
EFNA3P52797 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.44□□□□□ -0.1
EFNA3P52797 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.44□□□□□ -0.1
EFNA3P52797 PTP4A1P2-201ENST00000546033 454 ntBASIC14.44□□□□□ -0.1
EFNA3P52797 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.44□□□□□ -0.1
EFNA3P52797 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.44□□□□□ -0.1
EFNA3P52797 AC244669.2-201ENST00000612320 853 ntBASIC14.44□□□□□ -0.1
EFNA3P52797 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
EFNA3P52797 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.44□□□□□ -0.1
EFNA3P52797 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EFNA3P52797 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EFNA3P52797 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.44□□□□□ -0.1
EFNA3P52797 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EFNA3P52797 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
EFNA3P52797 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.44□□□□□ -0.1
EFNA3P52797 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.44□□□□□ -0.1
EFNA3P52797 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
EFNA3P52797 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.44□□□□□ -0.1
EFNA3P52797 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
EFNA3P52797 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
EFNA3P52797 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
EFNA3P52797 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
EFNA3P52797 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 AL513477.1-201ENST00000602865 2407 ntBASIC14.43□□□□□ -0.1
EFNA3P52797 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.43□□□□□ -0.1
EFNA3P52797 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.43□□□□□ -0.1
EFNA3P52797 AC148477.4-201ENST00000613430 1793 ntBASIC14.43□□□□□ -0.1
EFNA3P52797 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
EFNA3P52797 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
EFNA3P52797 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
EFNA3P52797 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.43□□□□□ -0.1
EFNA3P52797 MIR658-201ENST00000385210 100 ntBASIC14.43□□□□□ -0.1
EFNA3P52797 AC005229.1-201ENST00000392885 409 ntBASIC14.43□□□□□ -0.1
EFNA3P52797 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.43□□□□□ -0.1
EFNA3P52797 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.43□□□□□ -0.1
EFNA3P52797 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
EFNA3P52797 FTH1P14-201ENST00000482930 551 ntBASIC14.43□□□□□ -0.1
EFNA3P52797 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
EFNA3P52797 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.43□□□□□ -0.1
EFNA3P52797 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
EFNA3P52797 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.43□□□□□ -0.1
EFNA3P52797 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.43□□□□□ -0.1
EFNA3P52797 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNA3P52797 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.42□□□□□ -0.1
EFNA3P52797 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
EFNA3P52797 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
EFNA3P52797 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EFNA3P52797 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
EFNA3P52797 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.42□□□□□ -0.1
EFNA3P52797 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
EFNA3P52797 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms