Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF144AP50876 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF144AP50876 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF144AP50876 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.46□□□□□ -0.09
RNF144AP50876 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF144AP50876 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
RNF144AP50876 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.46□□□□□ -0.1
RNF144AP50876 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.46□□□□□ -0.1
RNF144AP50876 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RNF144AP50876 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.46□□□□□ -0.1
RNF144AP50876 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
RNF144AP50876 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
RNF144AP50876 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.46□□□□□ -0.1
RNF144AP50876 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RNF144AP50876 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RNF144AP50876 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.45□□□□□ -0.1
RNF144AP50876 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF144AP50876 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF144AP50876 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RNF144AP50876 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RNF144AP50876 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.45□□□□□ -0.1
RNF144AP50876 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RNF144AP50876 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RNF144AP50876 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.45□□□□□ -0.1
RNF144AP50876 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF144AP50876 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.45□□□□□ -0.1
RNF144AP50876 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF144AP50876 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.45□□□□□ -0.1
RNF144AP50876 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF144AP50876 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF144AP50876 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.45□□□□□ -0.1
RNF144AP50876 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RNF144AP50876 FO393414.2-201ENST00000405153 598 ntBASIC14.45□□□□□ -0.1
RNF144AP50876 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF144AP50876 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.45□□□□□ -0.1
RNF144AP50876 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.45□□□□□ -0.1
RNF144AP50876 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.45□□□□□ -0.1
RNF144AP50876 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.45□□□□□ -0.1
RNF144AP50876 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.45□□□□□ -0.1
RNF144AP50876 SPDYE18-201ENST00000510091 1050 ntBASIC14.45□□□□□ -0.1
RNF144AP50876 AC093214.1-201ENST00000511688 1107 ntBASIC14.45□□□□□ -0.1
RNF144AP50876 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RNF144AP50876 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.45□□□□□ -0.1
RNF144AP50876 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.45□□□□□ -0.1
RNF144AP50876 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RNF144AP50876 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
RNF144AP50876 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF144AP50876 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.45□□□□□ -0.1
RNF144AP50876 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RNF144AP50876 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF144AP50876 AC023024.2-201ENST00000623561 1993 ntBASIC14.45□□□□□ -0.1
RNF144AP50876 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF144AP50876 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF144AP50876 MYO15B-237ENST00000642007 4893 ntBASIC14.45□□□□□ -0.1
RNF144AP50876 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.45□□□□□ -0.1
RNF144AP50876 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.45□□□□□ -0.1
RNF144AP50876 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF144AP50876 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF144AP50876 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.45□□□□□ -0.1
RNF144AP50876 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RNF144AP50876 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.44□□□□□ -0.1
RNF144AP50876 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.44□□□□□ -0.1
RNF144AP50876 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RNF144AP50876 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.44□□□□□ -0.1
RNF144AP50876 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RNF144AP50876 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.44□□□□□ -0.1
RNF144AP50876 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RNF144AP50876 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RNF144AP50876 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.44□□□□□ -0.1
RNF144AP50876 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RNF144AP50876 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.44□□□□□ -0.1
RNF144AP50876 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.44□□□□□ -0.1
RNF144AP50876 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.44□□□□□ -0.1
RNF144AP50876 PMS2P2-201ENST00000425039 1128 ntBASIC14.44□□□□□ -0.1
RNF144AP50876 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.44□□□□□ -0.1
RNF144AP50876 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.44□□□□□ -0.1
RNF144AP50876 AC067863.1-201ENST00000494933 530 ntBASIC14.44□□□□□ -0.1
RNF144AP50876 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.44□□□□□ -0.1
RNF144AP50876 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.44□□□□□ -0.1
RNF144AP50876 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RNF144AP50876 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.44□□□□□ -0.1
RNF144AP50876 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.44□□□□□ -0.1
RNF144AP50876 AC005498.2-205ENST00000593218 784 ntBASIC14.44□□□□□ -0.1
RNF144AP50876 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.44□□□□□ -0.1
RNF144AP50876 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms