Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
TUBP50607 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.32■□□□□ 0.2
TUBP50607 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBP50607 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.32■□□□□ 0.2
TUBP50607 KRT8P22-201ENST00000562317 1415 ntBASIC16.32■□□□□ 0.2
TUBP50607 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
TUBP50607 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBP50607 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.32■□□□□ 0.2
TUBP50607 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
TUBP50607 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
TUBP50607 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBP50607 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TUBP50607 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TUBP50607 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBP50607 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBP50607 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.32■□□□□ 0.2
TUBP50607 AC023908.3-201ENST00000564211 3047 ntBASIC16.32■□□□□ 0.2
TUBP50607 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.32■□□□□ 0.2
TUBP50607 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TUBP50607 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TUBP50607 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBP50607 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBP50607 C8orf49-201ENST00000525043 1968 ntBASIC16.31■□□□□ 0.2
TUBP50607 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TUBP50607 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBP50607 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBP50607 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBP50607 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBP50607 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBP50607 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBP50607 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBP50607 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBP50607 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBP50607 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBP50607 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBP50607 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBP50607 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBP50607 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBP50607 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBP50607 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TUBP50607 GPR53P-205ENST00000457298 1084 ntBASIC16.31■□□□□ 0.2
TUBP50607 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBP50607 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.31■□□□□ 0.2
TUBP50607 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBP50607 AL359711.2-201ENST00000563105 872 ntBASIC16.31■□□□□ 0.2
TUBP50607 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBP50607 AC120045.2-201ENST00000567334 178 ntBASIC16.31■□□□□ 0.2
TUBP50607 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.31■□□□□ 0.2
TUBP50607 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.31■□□□□ 0.2
TUBP50607 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
TUBP50607 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBP50607 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TUBP50607 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBP50607 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBP50607 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TUBP50607 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBP50607 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBP50607 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBP50607 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBP50607 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBP50607 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBP50607 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBP50607 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBP50607 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.3■□□□□ 0.2
TUBP50607 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.3■□□□□ 0.2
TUBP50607 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBP50607 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBP50607 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TUBP50607 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TUBP50607 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBP50607 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBP50607 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBP50607 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBP50607 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TUBP50607 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBP50607 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
TUBP50607 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBP50607 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
TUBP50607 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBP50607 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBP50607 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBP50607 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.3■□□□□ 0.2
TUBP50607 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.3■□□□□ 0.2
TUBP50607 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.3■□□□□ 0.2
TUBP50607 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.3■□□□□ 0.2
TUBP50607 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.3■□□□□ 0.2
TUBP50607 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBP50607 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.3■□□□□ 0.2
TUBP50607 AC010319.3-201ENST00000597028 470 ntBASIC16.3■□□□□ 0.2
TUBP50607 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.3■□□□□ 0.2
TUBP50607 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBP50607 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.3■□□□□ 0.2
TUBP50607 CU634019.7-201ENST00000624153 1185 ntBASIC16.3■□□□□ 0.2
TUBP50607 FP236241.2-201ENST00000624906 1185 ntBASIC16.3■□□□□ 0.2
TUBP50607 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.3■□□□□ 0.2
TUBP50607 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBP50607 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TUBP50607 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBP50607 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TUBP50607 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms