Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SSR1P43307 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSR1P43307 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSR1P43307 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.55■□□□□ 0.24
SSR1P43307 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.55■□□□□ 0.24
SSR1P43307 TNRC18P2-201ENST00000417666 2714 ntBASIC16.55■□□□□ 0.24
SSR1P43307 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSR1P43307 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSR1P43307 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SSR1P43307 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SSR1P43307 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.55■□□□□ 0.24
SSR1P43307 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.55■□□□□ 0.24
SSR1P43307 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.55■□□□□ 0.24
SSR1P43307 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSR1P43307 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.55■□□□□ 0.24
SSR1P43307 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSR1P43307 AC091951.1-201ENST00000512854 2465 ntBASIC16.55■□□□□ 0.24
SSR1P43307 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.55■□□□□ 0.24
SSR1P43307 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSR1P43307 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSR1P43307 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.55■□□□□ 0.24
SSR1P43307 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SSR1P43307 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SSR1P43307 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SSR1P43307 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SSR1P43307 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSR1P43307 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.55■□□□□ 0.24
SSR1P43307 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.55■□□□□ 0.24
SSR1P43307 CNN2P11-201ENST00000429351 262 ntBASIC16.55■□□□□ 0.24
SSR1P43307 EEF1DP4-201ENST00000446006 880 ntBASIC16.55■□□□□ 0.24
SSR1P43307 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.55■□□□□ 0.24
SSR1P43307 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.55■□□□□ 0.24
SSR1P43307 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.55■□□□□ 0.24
SSR1P43307 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SSR1P43307 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.55■□□□□ 0.24
SSR1P43307 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.55■□□□□ 0.24
SSR1P43307 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.55■□□□□ 0.24
SSR1P43307 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.55■□□□□ 0.24
SSR1P43307 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSR1P43307 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSR1P43307 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSR1P43307 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSR1P43307 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.55■□□□□ 0.24
SSR1P43307 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
SSR1P43307 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSR1P43307 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SSR1P43307 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.55■□□□□ 0.24
SSR1P43307 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSR1P43307 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SSR1P43307 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.55■□□□□ 0.24
SSR1P43307 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.55■□□□□ 0.24
SSR1P43307 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.55■□□□□ 0.24
SSR1P43307 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.54■□□□□ 0.24
SSR1P43307 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.54■□□□□ 0.24
SSR1P43307 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.54■□□□□ 0.24
SSR1P43307 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSR1P43307 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.54■□□□□ 0.24
SSR1P43307 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.54■□□□□ 0.24
SSR1P43307 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SSR1P43307 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.54■□□□□ 0.24
SSR1P43307 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSR1P43307 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.54■□□□□ 0.24
SSR1P43307 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSR1P43307 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSR1P43307 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.54■□□□□ 0.24
SSR1P43307 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.54■□□□□ 0.24
SSR1P43307 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSR1P43307 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSR1P43307 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSR1P43307 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.54■□□□□ 0.24
SSR1P43307 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SSR1P43307 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSR1P43307 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.54■□□□□ 0.24
SSR1P43307 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSR1P43307 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSR1P43307 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SSR1P43307 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSR1P43307 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.54■□□□□ 0.24
SSR1P43307 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.54■□□□□ 0.24
SSR1P43307 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSR1P43307 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSR1P43307 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.54■□□□□ 0.24
SSR1P43307 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSR1P43307 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSR1P43307 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.54■□□□□ 0.24
SSR1P43307 AC097359.3-201ENST00000603982 1210 ntBASIC16.54■□□□□ 0.24
SSR1P43307 AC134684.3-201ENST00000641758 218 ntBASIC16.54■□□□□ 0.24
SSR1P43307 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSR1P43307 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.54■□□□□ 0.24
SSR1P43307 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSR1P43307 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.54■□□□□ 0.24
SSR1P43307 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSR1P43307 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SSR1P43307 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSR1P43307 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.54■□□□□ 0.24
SSR1P43307 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SSR1P43307 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSR1P43307 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSR1P43307 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.54■□□□□ 0.24
SSR1P43307 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms