Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.65■□□□□ 0.26
TNFSF9P41273 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFSF9P41273 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TNFSF9P41273 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFSF9P41273 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.65■□□□□ 0.26
TNFSF9P41273 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFSF9P41273 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.65■□□□□ 0.26
TNFSF9P41273 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFSF9P41273 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFSF9P41273 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFSF9P41273 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFSF9P41273 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFSF9P41273 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFSF9P41273 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
TNFSF9P41273 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
TNFSF9P41273 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFSF9P41273 OR8S1-201ENST00000310194 1080 ntBASIC16.65■□□□□ 0.26
TNFSF9P41273 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TNFSF9P41273 KLF2P2-201ENST00000416807 1039 ntBASIC16.65■□□□□ 0.26
TNFSF9P41273 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TNFSF9P41273 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.65■□□□□ 0.26
TNFSF9P41273 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.65■□□□□ 0.26
TNFSF9P41273 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFSF9P41273 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFSF9P41273 ACA64.2-201ENST00000459014 129 ntBASIC16.65■□□□□ 0.26
TNFSF9P41273 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFSF9P41273 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFSF9P41273 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFSF9P41273 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.65■□□□□ 0.26
TNFSF9P41273 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFSF9P41273 RAB43P1-201ENST00000561790 589 ntBASIC16.65■□□□□ 0.26
TNFSF9P41273 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TNFSF9P41273 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TNFSF9P41273 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.65■□□□□ 0.26
TNFSF9P41273 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TNFSF9P41273 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.65■□□□□ 0.26
TNFSF9P41273 PRSS30P-206ENST00000641773 873 ntBASIC16.65■□□□□ 0.26
TNFSF9P41273 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFSF9P41273 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFSF9P41273 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.65■□□□□ 0.26
TNFSF9P41273 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.65■□□□□ 0.26
TNFSF9P41273 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFSF9P41273 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFSF9P41273 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFSF9P41273 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TNFSF9P41273 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TNFSF9P41273 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFSF9P41273 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFSF9P41273 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFSF9P41273 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TNFSF9P41273 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFSF9P41273 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
TNFSF9P41273 AC126365.1-201ENST00000578585 1514 ntBASIC16.65■□□□□ 0.26
TNFSF9P41273 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.65■□□□□ 0.26
TNFSF9P41273 REXO1L5P-201ENST00000622260 2098 ntBASIC16.65■□□□□ 0.26
TNFSF9P41273 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TNFSF9P41273 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFSF9P41273 AL109954.1-202ENST00000564051 2148 ntBASIC16.64■□□□□ 0.25
TNFSF9P41273 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFSF9P41273 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.64■□□□□ 0.25
TNFSF9P41273 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFSF9P41273 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.64■□□□□ 0.25
TNFSF9P41273 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TNFSF9P41273 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFSF9P41273 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFSF9P41273 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.64■□□□□ 0.25
TNFSF9P41273 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFSF9P41273 AC005229.1-201ENST00000392885 409 ntBASIC16.64■□□□□ 0.25
TNFSF9P41273 AC092933.1-201ENST00000393644 945 ntBASIC16.64■□□□□ 0.25
TNFSF9P41273 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.64■□□□□ 0.25
TNFSF9P41273 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.64■□□□□ 0.25
TNFSF9P41273 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TNFSF9P41273 SNX29P1-201ENST00000548357 1007 ntBASIC16.64■□□□□ 0.25
TNFSF9P41273 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.64■□□□□ 0.25
TNFSF9P41273 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.64■□□□□ 0.25
TNFSF9P41273 GNRHR2-203ENST00000581100 1187 ntBASIC16.64■□□□□ 0.25
TNFSF9P41273 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.64■□□□□ 0.25
TNFSF9P41273 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFSF9P41273 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.64■□□□□ 0.25
TNFSF9P41273 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.64■□□□□ 0.25
TNFSF9P41273 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.64■□□□□ 0.25
TNFSF9P41273 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.64■□□□□ 0.25
TNFSF9P41273 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
TNFSF9P41273 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.64■□□□□ 0.25
TNFSF9P41273 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFSF9P41273 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFSF9P41273 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFSF9P41273 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFSF9P41273 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFSF9P41273 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TNFSF9P41273 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
TNFSF9P41273 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFSF9P41273 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
TNFSF9P41273 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFSF9P41273 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFSF9P41273 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFSF9P41273 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.64■□□□□ 0.25
TNFSF9P41273 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFSF9P41273 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TNFSF9P41273 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms