Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
COPB2P35606 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.61■□□□□ 0.41
COPB2P35606 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.61■□□□□ 0.41
COPB2P35606 C2orf69P2-201ENST00000562032 1123 ntBASIC17.61■□□□□ 0.41
COPB2P35606 ECM1P1-201ENST00000604092 1279 ntBASIC17.61■□□□□ 0.41
COPB2P35606 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
COPB2P35606 ENPP7P14-201ENST00000621765 1040 ntBASIC17.61■□□□□ 0.41
COPB2P35606 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.61■□□□□ 0.41
COPB2P35606 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.61■□□□□ 0.41
COPB2P35606 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
COPB2P35606 AC007787.1-201ENST00000588095 1583 ntBASIC17.61■□□□□ 0.41
COPB2P35606 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
COPB2P35606 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPB2P35606 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COPB2P35606 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPB2P35606 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.6■□□□□ 0.41
COPB2P35606 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPB2P35606 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPB2P35606 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPB2P35606 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COPB2P35606 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPB2P35606 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPB2P35606 RPL5P21-201ENST00000404620 815 ntBASIC17.6■□□□□ 0.41
COPB2P35606 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.6■□□□□ 0.41
COPB2P35606 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.6■□□□□ 0.41
COPB2P35606 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.6■□□□□ 0.41
COPB2P35606 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.6■□□□□ 0.41
COPB2P35606 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.6■□□□□ 0.41
COPB2P35606 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
COPB2P35606 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COPB2P35606 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.6■□□□□ 0.41
COPB2P35606 MIR4741-201ENST00000579822 90 ntBASIC17.6■□□□□ 0.41
COPB2P35606 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.6■□□□□ 0.41
COPB2P35606 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.6■□□□□ 0.41
COPB2P35606 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
COPB2P35606 AL008638.5-201ENST00000623814 1298 ntBASIC17.6■□□□□ 0.41
COPB2P35606 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.6■□□□□ 0.41
COPB2P35606 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COPB2P35606 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.6■□□□□ 0.41
COPB2P35606 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
COPB2P35606 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.6■□□□□ 0.41
COPB2P35606 AC084364.1-201ENST00000551967 1556 ntBASIC17.6■□□□□ 0.41
COPB2P35606 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.6■□□□□ 0.41
COPB2P35606 AC148477.4-201ENST00000613430 1793 ntBASIC17.6■□□□□ 0.41
COPB2P35606 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.6■□□□□ 0.41
COPB2P35606 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPB2P35606 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.6■□□□□ 0.41
COPB2P35606 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPB2P35606 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPB2P35606 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPB2P35606 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPB2P35606 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.59■□□□□ 0.41
COPB2P35606 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COPB2P35606 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPB2P35606 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPB2P35606 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.59■□□□□ 0.41
COPB2P35606 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.59■□□□□ 0.41
COPB2P35606 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
COPB2P35606 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COPB2P35606 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
COPB2P35606 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
COPB2P35606 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPB2P35606 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPB2P35606 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPB2P35606 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COPB2P35606 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.59■□□□□ 0.41
COPB2P35606 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.59■□□□□ 0.41
COPB2P35606 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COPB2P35606 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COPB2P35606 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
COPB2P35606 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.59■□□□□ 0.41
COPB2P35606 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPB2P35606 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
COPB2P35606 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPB2P35606 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.59■□□□□ 0.41
COPB2P35606 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COPB2P35606 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
COPB2P35606 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.59■□□□□ 0.41
COPB2P35606 AC007969.1-201ENST00000433675 447 ntBASIC17.59■□□□□ 0.41
COPB2P35606 AC004898.1-201ENST00000451057 766 ntBASIC17.59■□□□□ 0.41
COPB2P35606 AC104306.2-201ENST00000451877 341 ntBASIC17.59■□□□□ 0.41
COPB2P35606 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.59■□□□□ 0.41
COPB2P35606 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.59■□□□□ 0.41
COPB2P35606 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.59■□□□□ 0.41
COPB2P35606 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.59■□□□□ 0.41
COPB2P35606 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPB2P35606 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.59■□□□□ 0.41
COPB2P35606 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.59■□□□□ 0.41
COPB2P35606 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.59■□□□□ 0.41
COPB2P35606 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.59■□□□□ 0.41
COPB2P35606 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPB2P35606 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms