Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
RXRBP28702 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC19.69■□□□□ 0.74
RXRBP28702 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RXRBP28702 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC19.69■□□□□ 0.74
RXRBP28702 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RXRBP28702 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RXRBP28702 TMBIM7P-202ENST00000641474 1516 ntBASIC19.69■□□□□ 0.74
RXRBP28702 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RXRBP28702 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RXRBP28702 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RXRBP28702 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RXRBP28702 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RXRBP28702 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RXRBP28702 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RXRBP28702 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RXRBP28702 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
RXRBP28702 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.68■□□□□ 0.74
RXRBP28702 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.68■□□□□ 0.74
RXRBP28702 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RXRBP28702 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RXRBP28702 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RXRBP28702 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RXRBP28702 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RXRBP28702 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC19.68■□□□□ 0.74
RXRBP28702 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RXRBP28702 AL451000.1-201ENST00000451300 1186 ntBASIC19.68■□□□□ 0.74
RXRBP28702 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC19.68■□□□□ 0.74
RXRBP28702 AC006529.1-201ENST00000459978 637 ntBASIC19.68■□□□□ 0.74
RXRBP28702 RN7SL23P-201ENST00000484055 275 ntBASIC19.68■□□□□ 0.74
RXRBP28702 AC092612.1-201ENST00000514501 998 ntBASIC19.68■□□□□ 0.74
RXRBP28702 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RXRBP28702 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC19.68■□□□□ 0.74
RXRBP28702 AL512324.3-201ENST00000619383 882 ntBASIC19.68■□□□□ 0.74
RXRBP28702 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC19.68■□□□□ 0.74
RXRBP28702 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RXRBP28702 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RXRBP28702 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RXRBP28702 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
RXRBP28702 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RXRBP28702 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RXRBP28702 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.68■□□□□ 0.74
RXRBP28702 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RXRBP28702 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RXRBP28702 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RXRBP28702 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.67■□□□□ 0.74
RXRBP28702 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.67■□□□□ 0.74
RXRBP28702 CYP4F23P-201ENST00000593402 1579 ntBASIC19.67■□□□□ 0.74
RXRBP28702 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC19.67■□□□□ 0.74
RXRBP28702 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RXRBP28702 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC19.67■□□□□ 0.74
RXRBP28702 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RXRBP28702 AL512306.1-201ENST00000432698 848 ntBASIC19.67■□□□□ 0.74
RXRBP28702 AL157407.1-201ENST00000435784 904 ntBASIC19.67■□□□□ 0.74
RXRBP28702 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC19.67■□□□□ 0.74
RXRBP28702 CSNK1G2P1-201ENST00000442675 955 ntBASIC19.67■□□□□ 0.74
RXRBP28702 GNG10P1-201ENST00000452289 199 ntBASIC19.67■□□□□ 0.74
RXRBP28702 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC19.67■□□□□ 0.74
RXRBP28702 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC19.67■□□□□ 0.74
RXRBP28702 AC093826.1-201ENST00000508655 993 ntBASIC19.67■□□□□ 0.74
RXRBP28702 USB1-205ENST00000561743 1135 ntTSL 3 BASIC19.67■□□□□ 0.74
RXRBP28702 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC19.67■□□□□ 0.74
RXRBP28702 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.67■□□□□ 0.74
RXRBP28702 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC19.67■□□□□ 0.74
RXRBP28702 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RXRBP28702 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RXRBP28702 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RXRBP28702 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC19.67■□□□□ 0.74
RXRBP28702 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
RXRBP28702 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RXRBP28702 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RXRBP28702 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RXRBP28702 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RXRBP28702 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RXRBP28702 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RXRBP28702 MPI-203ENST00000535694 1523 ntTSL 2 BASIC19.66■□□□□ 0.74
RXRBP28702 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
RXRBP28702 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RXRBP28702 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RXRBP28702 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RXRBP28702 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC19.66■□□□□ 0.74
RXRBP28702 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RXRBP28702 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RXRBP28702 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RXRBP28702 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC19.66■□□□□ 0.74
RXRBP28702 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RXRBP28702 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RXRBP28702 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RXRBP28702 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC19.66■□□□□ 0.74
RXRBP28702 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC19.66■□□□□ 0.74
RXRBP28702 CASP3-205ENST00000517513 964 ntTSL 5 BASIC19.66■□□□□ 0.74
RXRBP28702 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC19.66■□□□□ 0.74
RXRBP28702 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.66■□□□□ 0.74
RXRBP28702 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC19.66■□□□□ 0.74
RXRBP28702 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC19.66■□□□□ 0.74
RXRBP28702 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC19.66■□□□□ 0.74
RXRBP28702 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RXRBP28702 AC254633.1-201ENST00000606790 345 ntBASIC19.66■□□□□ 0.74
RXRBP28702 AC010976.2-201ENST00000609697 852 ntBASIC19.66■□□□□ 0.74
RXRBP28702 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.66■□□□□ 0.74
RXRBP28702 PHF23-213ENST00000613632 850 ntTSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms