Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.93■□□□□ 0.46
ERCC3P19447 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.93■□□□□ 0.46
ERCC3P19447 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC3P19447 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC3P19447 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC3P19447 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC3P19447 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.92■□□□□ 0.46
ERCC3P19447 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ERCC3P19447 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC3P19447 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC3P19447 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.92■□□□□ 0.46
ERCC3P19447 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC3P19447 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.92■□□□□ 0.46
ERCC3P19447 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.92■□□□□ 0.46
ERCC3P19447 C2orf27AP3-201ENST00000434123 579 ntBASIC17.92■□□□□ 0.46
ERCC3P19447 AP001582.1-201ENST00000525856 295 ntBASIC17.92■□□□□ 0.46
ERCC3P19447 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.92■□□□□ 0.46
ERCC3P19447 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.92■□□□□ 0.46
ERCC3P19447 AC015910.1-201ENST00000579400 975 ntBASIC17.92■□□□□ 0.46
ERCC3P19447 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.92■□□□□ 0.46
ERCC3P19447 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.92■□□□□ 0.46
ERCC3P19447 AL354718.3-201ENST00000616414 581 ntBASIC17.92■□□□□ 0.46
ERCC3P19447 CR382287.1-201ENST00000623954 586 ntBASIC17.92■□□□□ 0.46
ERCC3P19447 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.92■□□□□ 0.46
ERCC3P19447 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.92■□□□□ 0.46
ERCC3P19447 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC3P19447 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ERCC3P19447 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC3P19447 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC3P19447 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.92■□□□□ 0.46
ERCC3P19447 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC3P19447 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.91■□□□□ 0.46
ERCC3P19447 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ERCC3P19447 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ERCC3P19447 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ERCC3P19447 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ERCC3P19447 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ERCC3P19447 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
ERCC3P19447 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ERCC3P19447 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.91■□□□□ 0.46
ERCC3P19447 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.91■□□□□ 0.46
ERCC3P19447 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.91■□□□□ 0.46
ERCC3P19447 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ERCC3P19447 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ERCC3P19447 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ERCC3P19447 RPL13AP20-201ENST00000459725 609 ntBASIC17.91■□□□□ 0.46
ERCC3P19447 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ERCC3P19447 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.91■□□□□ 0.46
ERCC3P19447 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ERCC3P19447 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.91■□□□□ 0.46
ERCC3P19447 AC244093.1-201ENST00000610837 814 ntBASIC17.91■□□□□ 0.46
ERCC3P19447 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ERCC3P19447 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ERCC3P19447 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ERCC3P19447 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ERCC3P19447 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ERCC3P19447 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ERCC3P19447 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
ERCC3P19447 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.91■□□□□ 0.46
ERCC3P19447 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ERCC3P19447 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ERCC3P19447 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ERCC3P19447 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ERCC3P19447 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ERCC3P19447 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.9■□□□□ 0.46
ERCC3P19447 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ERCC3P19447 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.9■□□□□ 0.46
ERCC3P19447 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ERCC3P19447 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ERCC3P19447 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ERCC3P19447 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.9■□□□□ 0.46
ERCC3P19447 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ERCC3P19447 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
ERCC3P19447 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ERCC3P19447 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ERCC3P19447 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ERCC3P19447 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ERCC3P19447 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ERCC3P19447 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ERCC3P19447 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.9■□□□□ 0.46
ERCC3P19447 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ERCC3P19447 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ERCC3P19447 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.9■□□□□ 0.46
ERCC3P19447 MIR648-201ENST00000385046 94 ntBASIC17.9■□□□□ 0.46
ERCC3P19447 AL133267.1-201ENST00000398220 340 ntBASIC17.9■□□□□ 0.46
ERCC3P19447 PFN1P12-201ENST00000455938 534 ntBASIC17.9■□□□□ 0.46
ERCC3P19447 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.9■□□□□ 0.46
ERCC3P19447 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ERCC3P19447 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ERCC3P19447 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.9■□□□□ 0.46
ERCC3P19447 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.9■□□□□ 0.46
ERCC3P19447 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ERCC3P19447 AC008687.7-202ENST00000637404 953 ntBASIC17.9■□□□□ 0.46
ERCC3P19447 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ERCC3P19447 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.9■□□□□ 0.46
ERCC3P19447 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ERCC3P19447 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ERCC3P19447 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.9■□□□□ 0.46
ERCC3P19447 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
ERCC3P19447 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms