Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD58P19256 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD58P19256 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD58P19256 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CD58P19256 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD58P19256 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD58P19256 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD58P19256 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD58P19256 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD58P19256 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD58P19256 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CD58P19256 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD58P19256 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD58P19256 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD58P19256 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD58P19256 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CD58P19256 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD58P19256 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD58P19256 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD58P19256 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD58P19256 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD58P19256 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CD58P19256 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.61■□□□□ 0.25
CD58P19256 AL353779.1-201ENST00000434793 351 ntBASIC16.61■□□□□ 0.25
CD58P19256 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.61■□□□□ 0.25
CD58P19256 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.61■□□□□ 0.25
CD58P19256 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.61■□□□□ 0.25
CD58P19256 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.61■□□□□ 0.25
CD58P19256 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.61■□□□□ 0.25
CD58P19256 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.61■□□□□ 0.25
CD58P19256 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CD58P19256 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CD58P19256 AC008494.3-201ENST00000606615 944 ntBASIC16.61■□□□□ 0.25
CD58P19256 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.61■□□□□ 0.25
CD58P19256 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.61■□□□□ 0.25
CD58P19256 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD58P19256 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD58P19256 AC006486.2-201ENST00000624246 2199 ntBASIC16.61■□□□□ 0.25
CD58P19256 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.61■□□□□ 0.25
CD58P19256 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD58P19256 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CD58P19256 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD58P19256 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD58P19256 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD58P19256 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD58P19256 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD58P19256 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD58P19256 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD58P19256 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD58P19256 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CD58P19256 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CD58P19256 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CD58P19256 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD58P19256 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD58P19256 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD58P19256 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.6■□□□□ 0.25
CD58P19256 TNRC18P2-201ENST00000417666 2714 ntBASIC16.6■□□□□ 0.25
CD58P19256 AC148477.4-201ENST00000613430 1793 ntBASIC16.6■□□□□ 0.25
CD58P19256 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CD58P19256 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD58P19256 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.6■□□□□ 0.25
CD58P19256 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CD58P19256 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.6■□□□□ 0.25
CD58P19256 AC087499.6-201ENST00000411576 835 ntBASIC16.6■□□□□ 0.25
CD58P19256 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.6■□□□□ 0.25
CD58P19256 MYCLP2-201ENST00000449268 967 ntBASIC16.6■□□□□ 0.25
CD58P19256 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD58P19256 AC104596.2-201ENST00000512793 793 ntBASIC16.6■□□□□ 0.25
CD58P19256 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.6■□□□□ 0.25
CD58P19256 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CD58P19256 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.6■□□□□ 0.25
CD58P19256 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.6■□□□□ 0.25
CD58P19256 WASH4P-201ENST00000564273 1246 ntBASIC16.6■□□□□ 0.25
CD58P19256 RRP7BP-205ENST00000566851 833 ntBASIC16.6■□□□□ 0.25
CD58P19256 AL049840.4-201ENST00000602422 811 ntBASIC16.6■□□□□ 0.25
CD58P19256 AC093726.1-201ENST00000608064 963 ntBASIC16.6■□□□□ 0.25
CD58P19256 AC099568.2-201ENST00000609194 695 ntBASIC16.6■□□□□ 0.25
CD58P19256 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD58P19256 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD58P19256 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD58P19256 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD58P19256 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
CD58P19256 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD58P19256 AL391825.1-201ENST00000457671 1364 ntBASIC16.6■□□□□ 0.25
CD58P19256 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD58P19256 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD58P19256 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.6■□□□□ 0.25
CD58P19256 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CD58P19256 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CD58P19256 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.59■□□□□ 0.25
CD58P19256 AC126755.1-201ENST00000525846 6405 ntBASIC16.59■□□□□ 0.25
CD58P19256 AC091951.1-201ENST00000512854 2465 ntBASIC16.59■□□□□ 0.25
CD58P19256 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD58P19256 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD58P19256 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.59■□□□□ 0.25
CD58P19256 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CD58P19256 AC023024.2-201ENST00000623561 1993 ntBASIC16.59■□□□□ 0.25
CD58P19256 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CD58P19256 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD58P19256 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms