Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CFTRP13569 API5-202ENST00000420461 2009 ntTSL 2 BASIC25.66■■□□□ 1.7
CFTRP13569 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
CFTRP13569 GCK-209ENST00000616242 2260 ntTSL 5 BASIC25.66■■□□□ 1.7
CFTRP13569 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC25.66■■□□□ 1.7
CFTRP13569 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CFTRP13569 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CFTRP13569 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CFTRP13569 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CFTRP13569 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CFTRP13569 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CFTRP13569 AL603832.2-201ENST00000566195 2125 ntBASIC25.66■■□□□ 1.7
CFTRP13569 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CFTRP13569 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
CFTRP13569 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
CFTRP13569 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC25.66■■□□□ 1.7
CFTRP13569 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CFTRP13569 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CFTRP13569 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC25.66■■□□□ 1.7
CFTRP13569 BCAS2P2-201ENST00000425064 674 ntBASIC25.66■■□□□ 1.7
CFTRP13569 AC114947.1-202ENST00000514136 344 ntBASIC25.66■■□□□ 1.7
CFTRP13569 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC25.66■■□□□ 1.7
CFTRP13569 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC25.66■■□□□ 1.7
CFTRP13569 AL118516.1-201ENST00000564152 670 ntBASIC25.66■■□□□ 1.7
CFTRP13569 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CFTRP13569 AC027601.3-201ENST00000622907 509 ntBASIC25.66■■□□□ 1.7
CFTRP13569 ZBED1P1-201ENST00000502364 1930 ntBASIC25.66■■□□□ 1.7
CFTRP13569 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC25.65■■□□□ 1.7
CFTRP13569 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CFTRP13569 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
CFTRP13569 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC25.65■■□□□ 1.7
CFTRP13569 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CFTRP13569 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CFTRP13569 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CFTRP13569 ACE-203ENST00000413513 2237 ntTSL 2 BASIC25.65■■□□□ 1.7
CFTRP13569 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC25.65■■□□□ 1.7
CFTRP13569 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CFTRP13569 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC25.65■■□□□ 1.7
CFTRP13569 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC25.65■■□□□ 1.7
CFTRP13569 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC25.65■■□□□ 1.7
CFTRP13569 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC25.65■■□□□ 1.7
CFTRP13569 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC25.65■■□□□ 1.7
CFTRP13569 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
CFTRP13569 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC25.65■■□□□ 1.7
CFTRP13569 AC106820.2-201ENST00000563775 3264 ntBASIC25.65■■□□□ 1.7
CFTRP13569 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC25.64■■□□□ 1.7
CFTRP13569 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CFTRP13569 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC25.64■■□□□ 1.7
CFTRP13569 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC25.64■■□□□ 1.7
CFTRP13569 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CFTRP13569 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CFTRP13569 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC25.64■■□□□ 1.69
CFTRP13569 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CFTRP13569 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CFTRP13569 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC25.64■■□□□ 1.69
CFTRP13569 ALG1L13P-202ENST00000519320 584 ntBASIC25.64■■□□□ 1.69
CFTRP13569 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC25.64■■□□□ 1.69
CFTRP13569 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC25.64■■□□□ 1.69
CFTRP13569 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC25.64■■□□□ 1.69
CFTRP13569 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC25.64■■□□□ 1.69
CFTRP13569 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
CFTRP13569 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CFTRP13569 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.69
CFTRP13569 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC25.64■■□□□ 1.69
CFTRP13569 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
CFTRP13569 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CFTRP13569 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
CFTRP13569 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
CFTRP13569 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CFTRP13569 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CFTRP13569 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CFTRP13569 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC25.63■■□□□ 1.69
CFTRP13569 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC25.63■■□□□ 1.69
CFTRP13569 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CFTRP13569 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CFTRP13569 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CFTRP13569 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CFTRP13569 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CFTRP13569 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CFTRP13569 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CFTRP13569 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC25.63■■□□□ 1.69
CFTRP13569 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CFTRP13569 LINC00634-202ENST00000505157 222 ntBASIC25.63■■□□□ 1.69
CFTRP13569 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC25.63■■□□□ 1.69
CFTRP13569 DNM1P51-201ENST00000558149 522 ntBASIC25.63■■□□□ 1.69
CFTRP13569 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC25.63■■□□□ 1.69
CFTRP13569 NAMA-206ENST00000605377 509 ntTSL 5 BASIC25.63■■□□□ 1.69
CFTRP13569 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC25.63■■□□□ 1.69
CFTRP13569 AL022334.2-201ENST00000610000 484 ntBASIC25.63■■□□□ 1.69
CFTRP13569 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CFTRP13569 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CFTRP13569 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CFTRP13569 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
CFTRP13569 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CFTRP13569 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CFTRP13569 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC25.62■■□□□ 1.69
CFTRP13569 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC25.62■■□□□ 1.69
CFTRP13569 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CFTRP13569 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CFTRP13569 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms