Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
COL11A1P12107 AL360270.3-201ENST00000609118 1348 ntBASIC17.17■□□□□ 0.34
COL11A1P12107 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.17■□□□□ 0.34
COL11A1P12107 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
COL11A1P12107 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL11A1P12107 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
COL11A1P12107 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL11A1P12107 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.17■□□□□ 0.34
COL11A1P12107 AIRN-201ENST00000601203 4374 ntBASIC17.17■□□□□ 0.34
COL11A1P12107 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL11A1P12107 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.17■□□□□ 0.34
COL11A1P12107 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.17■□□□□ 0.34
COL11A1P12107 RPS2P36-201ENST00000456516 831 ntBASIC17.17■□□□□ 0.34
COL11A1P12107 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.17■□□□□ 0.34
COL11A1P12107 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.17■□□□□ 0.34
COL11A1P12107 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.17■□□□□ 0.34
COL11A1P12107 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL11A1P12107 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.17■□□□□ 0.34
COL11A1P12107 AC244452.3-201ENST00000636814 210 ntBASIC17.17■□□□□ 0.34
COL11A1P12107 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.16■□□□□ 0.34
COL11A1P12107 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.16■□□□□ 0.34
COL11A1P12107 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
COL11A1P12107 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
COL11A1P12107 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.16■□□□□ 0.34
COL11A1P12107 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL11A1P12107 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.16■□□□□ 0.34
COL11A1P12107 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL11A1P12107 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.16■□□□□ 0.34
COL11A1P12107 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL11A1P12107 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL11A1P12107 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL11A1P12107 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.16■□□□□ 0.34
COL11A1P12107 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL11A1P12107 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
COL11A1P12107 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL11A1P12107 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
COL11A1P12107 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
COL11A1P12107 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.16■□□□□ 0.34
COL11A1P12107 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL11A1P12107 AC005740.2-201ENST00000511085 419 ntBASIC17.16■□□□□ 0.34
COL11A1P12107 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.16■□□□□ 0.34
COL11A1P12107 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
COL11A1P12107 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
COL11A1P12107 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL11A1P12107 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.16■□□□□ 0.34
COL11A1P12107 AP000346.4-201ENST00000614827 381 ntBASIC17.16■□□□□ 0.34
COL11A1P12107 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.16■□□□□ 0.34
COL11A1P12107 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.16■□□□□ 0.34
COL11A1P12107 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL11A1P12107 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL11A1P12107 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL11A1P12107 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL11A1P12107 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL11A1P12107 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
COL11A1P12107 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL11A1P12107 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.15■□□□□ 0.34
COL11A1P12107 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL11A1P12107 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL11A1P12107 MROH4P-201ENST00000431302 1578 ntBASIC17.15■□□□□ 0.34
COL11A1P12107 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
COL11A1P12107 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL11A1P12107 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL11A1P12107 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL11A1P12107 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL11A1P12107 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
COL11A1P12107 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
COL11A1P12107 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.15■□□□□ 0.34
COL11A1P12107 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.15■□□□□ 0.34
COL11A1P12107 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.15■□□□□ 0.34
COL11A1P12107 RCC2P8-201ENST00000502779 1035 ntBASIC17.15■□□□□ 0.34
COL11A1P12107 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.15■□□□□ 0.34
COL11A1P12107 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.15■□□□□ 0.34
COL11A1P12107 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL11A1P12107 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL11A1P12107 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.15■□□□□ 0.34
COL11A1P12107 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.15■□□□□ 0.34
COL11A1P12107 AL133499.1-201ENST00000596207 608 ntBASIC17.15■□□□□ 0.34
COL11A1P12107 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.15■□□□□ 0.34
COL11A1P12107 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL11A1P12107 AL136295.7-201ENST00000619226 1200 ntBASIC17.15■□□□□ 0.34
COL11A1P12107 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.15■□□□□ 0.34
COL11A1P12107 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.15■□□□□ 0.34
COL11A1P12107 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL11A1P12107 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL11A1P12107 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL11A1P12107 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL11A1P12107 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL11A1P12107 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL11A1P12107 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.15■□□□□ 0.34
COL11A1P12107 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL11A1P12107 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL11A1P12107 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.15■□□□□ 0.34
COL11A1P12107 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL11A1P12107 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
COL11A1P12107 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.15■□□□□ 0.34
COL11A1P12107 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
COL11A1P12107 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
COL11A1P12107 AC091046.1-201ENST00000331871 207 ntBASIC17.14■□□□□ 0.34
COL11A1P12107 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
COL11A1P12107 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms