Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.87□□□□□ -0.19
CDRT1O95170 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.87□□□□□ -0.19
CDRT1O95170 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CDRT1O95170 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.87□□□□□ -0.19
CDRT1O95170 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 AC009947.1-201ENST00000444350 727 ntBASIC13.87□□□□□ -0.19
CDRT1O95170 KRT18P34-201ENST00000488218 1270 ntBASIC13.87□□□□□ -0.19
CDRT1O95170 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CDRT1O95170 UNC93B6-202ENST00000528242 690 ntBASIC13.87□□□□□ -0.19
CDRT1O95170 AC243562.2-201ENST00000561247 970 ntBASIC13.87□□□□□ -0.19
CDRT1O95170 AC002347.1-201ENST00000569543 541 ntBASIC13.87□□□□□ -0.19
CDRT1O95170 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.87□□□□□ -0.19
CDRT1O95170 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CDRT1O95170 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
CDRT1O95170 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CDRT1O95170 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
CDRT1O95170 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.87□□□□□ -0.19
CDRT1O95170 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.87□□□□□ -0.19
CDRT1O95170 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.87□□□□□ -0.19
CDRT1O95170 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.87□□□□□ -0.19
CDRT1O95170 BNIP3P1-202ENST00000550043 1585 ntBASIC13.87□□□□□ -0.19
CDRT1O95170 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.87□□□□□ -0.19
CDRT1O95170 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CDRT1O95170 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.87□□□□□ -0.19
CDRT1O95170 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDRT1O95170 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.86□□□□□ -0.19
CDRT1O95170 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDRT1O95170 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDRT1O95170 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDRT1O95170 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CDRT1O95170 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.86□□□□□ -0.19
CDRT1O95170 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.86□□□□□ -0.19
CDRT1O95170 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDRT1O95170 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDRT1O95170 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.86□□□□□ -0.19
CDRT1O95170 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.86□□□□□ -0.19
CDRT1O95170 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDRT1O95170 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDRT1O95170 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDRT1O95170 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.86□□□□□ -0.19
CDRT1O95170 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDRT1O95170 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDRT1O95170 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.86□□□□□ -0.19
CDRT1O95170 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.86□□□□□ -0.19
CDRT1O95170 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.86□□□□□ -0.19
CDRT1O95170 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.86□□□□□ -0.19
CDRT1O95170 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.86□□□□□ -0.19
CDRT1O95170 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.86□□□□□ -0.19
CDRT1O95170 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.86□□□□□ -0.19
CDRT1O95170 RN7SL510P-201ENST00000581311 263 ntBASIC13.86□□□□□ -0.19
CDRT1O95170 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.86□□□□□ -0.19
CDRT1O95170 AL009183.1-201ENST00000603760 355 ntBASIC13.86□□□□□ -0.19
CDRT1O95170 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.86□□□□□ -0.19
CDRT1O95170 AL031008.1-201ENST00000619963 541 ntBASIC13.86□□□□□ -0.19
CDRT1O95170 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.86□□□□□ -0.19
CDRT1O95170 AC116407.3-201ENST00000623905 1129 ntBASIC13.86□□□□□ -0.19
CDRT1O95170 AC010507.1-201ENST00000633895 436 ntBASIC13.86□□□□□ -0.19
CDRT1O95170 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDRT1O95170 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
CDRT1O95170 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDRT1O95170 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDRT1O95170 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CDRT1O95170 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDRT1O95170 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.86□□□□□ -0.19
CDRT1O95170 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDRT1O95170 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDRT1O95170 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CDRT1O95170 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CDRT1O95170 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDRT1O95170 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CDRT1O95170 AC113367.3-201ENST00000508316 1912 ntBASIC13.86□□□□□ -0.19
CDRT1O95170 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.86□□□□□ -0.19
CDRT1O95170 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDRT1O95170 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDRT1O95170 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.86□□□□□ -0.19
CDRT1O95170 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.86□□□□□ -0.19
CDRT1O95170 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDRT1O95170 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms