Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PMPCBO75439 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.74■□□□□ 0.11
PMPCBO75439 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PMPCBO75439 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PMPCBO75439 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PMPCBO75439 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PMPCBO75439 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PMPCBO75439 SPDYE19P-201ENST00000338590 713 ntBASIC15.74■□□□□ 0.11
PMPCBO75439 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PMPCBO75439 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.74■□□□□ 0.11
PMPCBO75439 GNAQP1-201ENST00000444815 1067 ntBASIC15.74■□□□□ 0.11
PMPCBO75439 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PMPCBO75439 DOC2GP-202ENST00000514950 1163 ntBASIC15.74■□□□□ 0.11
PMPCBO75439 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.74■□□□□ 0.11
PMPCBO75439 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PMPCBO75439 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.74■□□□□ 0.11
PMPCBO75439 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PMPCBO75439 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.74■□□□□ 0.11
PMPCBO75439 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PMPCBO75439 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PMPCBO75439 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PMPCBO75439 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.74■□□□□ 0.11
PMPCBO75439 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PMPCBO75439 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PMPCBO75439 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PMPCBO75439 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PMPCBO75439 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PMPCBO75439 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
PMPCBO75439 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PMPCBO75439 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PMPCBO75439 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PMPCBO75439 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PMPCBO75439 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PMPCBO75439 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PMPCBO75439 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.73■□□□□ 0.11
PMPCBO75439 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.73■□□□□ 0.11
PMPCBO75439 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PMPCBO75439 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.73■□□□□ 0.11
PMPCBO75439 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PMPCBO75439 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PMPCBO75439 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PMPCBO75439 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PMPCBO75439 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PMPCBO75439 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PMPCBO75439 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PMPCBO75439 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PMPCBO75439 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.73■□□□□ 0.11
PMPCBO75439 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PMPCBO75439 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.73■□□□□ 0.11
PMPCBO75439 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.73■□□□□ 0.11
PMPCBO75439 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PMPCBO75439 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
PMPCBO75439 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.73■□□□□ 0.11
PMPCBO75439 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
PMPCBO75439 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PMPCBO75439 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PMPCBO75439 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
PMPCBO75439 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PMPCBO75439 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.73■□□□□ 0.11
PMPCBO75439 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.73■□□□□ 0.11
PMPCBO75439 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PMPCBO75439 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PMPCBO75439 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PMPCBO75439 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.73■□□□□ 0.11
PMPCBO75439 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PMPCBO75439 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PMPCBO75439 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PMPCBO75439 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMPCBO75439 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PMPCBO75439 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMPCBO75439 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PMPCBO75439 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMPCBO75439 CLK3P2-201ENST00000427566 1453 ntBASIC15.72■□□□□ 0.11
PMPCBO75439 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMPCBO75439 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.72■□□□□ 0.11
PMPCBO75439 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMPCBO75439 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMPCBO75439 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMPCBO75439 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMPCBO75439 TCAF2P1-201ENST00000291129 2421 ntBASIC15.72■□□□□ 0.11
PMPCBO75439 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.72■□□□□ 0.11
PMPCBO75439 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PMPCBO75439 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
PMPCBO75439 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.72■□□□□ 0.11
PMPCBO75439 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PMPCBO75439 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.72■□□□□ 0.11
PMPCBO75439 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.72■□□□□ 0.11
PMPCBO75439 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.72■□□□□ 0.11
PMPCBO75439 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.72■□□□□ 0.11
PMPCBO75439 TPRX2P-201ENST00000535362 881 ntBASIC15.72■□□□□ 0.11
PMPCBO75439 AC023310.3-201ENST00000557027 670 ntBASIC15.72■□□□□ 0.11
PMPCBO75439 AC100756.1-201ENST00000562736 682 ntBASIC15.72■□□□□ 0.11
PMPCBO75439 AC138749.3-201ENST00000567691 622 ntBASIC15.72■□□□□ 0.11
PMPCBO75439 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.72■□□□□ 0.11
PMPCBO75439 AC116165.1-201ENST00000611806 668 ntBASIC15.72■□□□□ 0.11
PMPCBO75439 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PMPCBO75439 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.72■□□□□ 0.11
PMPCBO75439 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMPCBO75439 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PMPCBO75439 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms